User profiles for B. J. Clavijo
Bernardo J. ClavijoBioinformatic Algorithms Development Verified email at illumina.com Cited by 6061 |
A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome
…, S Ayling, RH Ramirez-Gonzalez, BJ Clavijo… - Science, 2014 - science.org
An ordered draft sequence of the 17-gigabase hexaploid bread wheat (Triticum aestivum)
genome has been produced by sequencing isolated chromosome arms. We have annotated …
genome has been produced by sequencing isolated chromosome arms. We have annotated …
Ancient hybridizations among the ancestral genomes of bread wheat
…, S Ayling, RH Ramirez-Gonzalez, BJ Clavijo… - science, 2014 - science.org
The allohexaploid bread wheat genome consists of three closely related subgenomes (A, B,
and D), but a clear understanding of their phylogenetic history has been lacking. We used …
and D), but a clear understanding of their phylogenetic history has been lacking. We used …
KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies
Motivation De novo assembly of whole genome shotgun (WGS) next-generation sequencing
(NGS) data benefits from high-quality input with high coverage. However, in practice, …
(NGS) data benefits from high-quality input with high coverage. However, in practice, …
An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for …
Advances in genome sequencing and assembly technologies are generating many high-quality
genome sequences, but assemblies of large, repeat-rich polyploid genomes, such as …
genome sequences, but assemblies of large, repeat-rich polyploid genomes, such as …
The first near-complete assembly of the hexaploid bread wheat genome, Triticum aestivum
Common bread wheat, Triticum aestivum, has one of the most complex genomes known to
science, with 6 copies of each chromosome, enormous numbers of near-identical sequences …
science, with 6 copies of each chromosome, enormous numbers of near-identical sequences …
NextClip: an analysis and read preparation tool for Nextera Long Mate Pair libraries
Illumina’s recently released Nextera Long Mate Pair (LMP) kit enables production of jumping
libraries of up to 12 kb. The LMP libraries are an invaluable resource for carrying out …
libraries of up to 12 kb. The LMP libraries are an invaluable resource for carrying out …
Genome‐guided investigation of plant natural product biosynthesis
F Kellner, J Kim, BJ Clavijo, JP Hamilton… - The Plant …, 2015 - Wiley Online Library
The medicinal plant Madagascar periwinkle, C atharanthus roseus (L.) G. Don, produces
hundreds of biologically active monoterpene‐derived indole alkaloid ( MIA ) metabolites and is …
hundreds of biologically active monoterpene‐derived indole alkaloid ( MIA ) metabolites and is …
[HTML][HTML] Genome sequence and genetic diversity of European ash trees
…, DJ Studholme, J Zohren, DL Salmon, BJ Clavijo… - Nature, 2017 - nature.com
Ash trees (genus Fraxinus, family Oleaceae) are widespread throughout the Northern
Hemisphere, but are being devastated in Europe by the fungus Hymenoscyphus fraxineus, …
Hemisphere, but are being devastated in Europe by the fungus Hymenoscyphus fraxineus, …
[HTML][HTML] The ash dieback invasion of Europe was founded by two genetically divergent individuals
…, M Rafiqi, G Kaithakottil, BJ Clavijo… - Nature Ecology & …, 2018 - nature.com
Accelerating international trade and climate change make pathogen spread an increasing
concern. Hymenoscyphus fraxineus, the causal agent of ash dieback, is a fungal pathogen …
concern. Hymenoscyphus fraxineus, the causal agent of ash dieback, is a fungal pathogen …
A genome assembly of the barley 'transformation reference'cultivar golden promise
…, D Heavens, L Milne, BJ Clavijo… - G3: Genes …, 2020 - academic.oup.com
Barley (Hordeum vulgare) is one of the most important crops worldwide and is also considered
a research model for the large-genome small grain temperate cereals. Despite genomic …
a research model for the large-genome small grain temperate cereals. Despite genomic …