[HTML][HTML] The Atlantic salmon genome provides insights into rediploidization
…, JA Yorke, AJ Nederbragt, A Tooming-Klunderud… - Nature, 2016 - nature.com
The whole-genome duplication 80 million years ago of the common ancestor of salmonids (salmonid-specific
fourth vertebrate whole-genome duplication, Ss4R) provides unique …
fourth vertebrate whole-genome duplication, Ss4R) provides unique …
[HTML][HTML] Dissemination of Cephalosporin Resistance Genes between Escherichia coli Strains from Farm Animals and Humans by Specific Plasmid Lineages
…, Y Du, J Hu, Y Lei, N Li, A Tooming-Klunderud… - PLoS …, 2014 - journals.plos.org
Third-generation cephalosporins are a class of β-lactam antibiotics that are often used for
the treatment of human infections caused by Gram-negative bacteria, especially Escherichia …
the treatment of human infections caused by Gram-negative bacteria, especially Escherichia …
[HTML][HTML] The genome sequence of Atlantic cod reveals a unique immune system
…, Ø Andersen, K Lagesen, A Tooming-Klunderud… - Nature, 2011 - nature.com
Atlantic cod (Gadus morhua) is a large, cold-adapted teleost that sustains long-standing
commercial fisheries and incipient aquaculture 1 , 2 . Here we present the genome sequence of …
commercial fisheries and incipient aquaculture 1 , 2 . Here we present the genome sequence of …
PacBio metabarcoding of Fungi and other eukaryotes: errors, biases and perspectives
L Tedersoo, A Tooming‐Klunderud… - New Phytologist, 2018 - Wiley Online Library
Second‐generation, high‐throughput sequencing methods have greatly improved our
understanding of the ecology of soil microorganisms, yet the short barcodes (< 500 bp) provide …
understanding of the ecology of soil microorganisms, yet the short barcodes (< 500 bp) provide …
[HTML][HTML] An improved genome assembly uncovers prolific tandem repeats in Atlantic cod
…, P Peluso, RB Edvardsen, A Tooming-Klunderud… - BMC genomics, 2017 - Springer
Background The first Atlantic cod (Gadus morhua) genome assembly published in 2011
was one of the early genome assemblies exclusively based on high-throughput 454 …
was one of the early genome assemblies exclusively based on high-throughput 454 …
[HTML][HTML] Improved metagenome assemblies and taxonomic binning using long-read circular consensus sequence data
JA Frank, Y Pan, A Tooming-Klunderud, VGH Eijsink… - Scientific reports, 2016 - nature.com
DNA assembly is a core methodological step in metagenomic pipelines used to study the
structure and function within microbial communities. Here we investigate the utility of Pacific …
structure and function within microbial communities. Here we investigate the utility of Pacific …
[HTML][HTML] Gut microbiota dynamics during dietary shift in eastern African cichlid fishes
The gut microbiota structure reflects both a host phylogenetic history and a signature of
adaptation to the host ecological, mainly trophic niches. African cichlid fishes, with their array of …
adaptation to the host ecological, mainly trophic niches. African cichlid fishes, with their array of …
Myostatin (MSTN) gene duplications in Atlantic salmon (Salmo salar): evidence for different selective pressure on teleost MSTN-1 and-2
TKK Østbye, OF Wetten, A Tooming-Klunderud… - Gene, 2007 - Elsevier
Whereas the negative muscle regulator myostatin (MSTN) in mammals is almost exclusively
expressed in the muscle by a single encoding gene, teleost fish possess at least two MSTN …
expressed in the muscle by a single encoding gene, teleost fish possess at least two MSTN …
[HTML][HTML] Use of high throughput sequencing and light microscopy show contrasting results in a study of phytoplankton occurrence in a freshwater environment
Assessing phytoplankton diversity is of primary importance for both basic and applied
ecological studies. Following the advances in molecular methods, phytoplankton studies are …
ecological studies. Following the advances in molecular methods, phytoplankton studies are …
[HTML][HTML] Loss of stomach, loss of appetite? Sequencing of the ballan wrasse (Labrus bergylta) genome and intestinal transcriptomic profiling illuminate the evolution …
…, MH Solbakken, I Rønnestad, A Tooming-Klunderud… - BMC genomics, 2018 - Springer
Background The ballan wrasse (Labrus bergylta) belongs to a large teleost family containing
more than 600 species showing several unique evolutionary traits such as lack of stomach …
more than 600 species showing several unique evolutionary traits such as lack of stomach …