The utility of single nucleotide polymorphism (SNP) data in phylogenetics
Resolving the genealogy of life—the phylogenetic relationships that describe the evolutionary
history of species—remains one of the great challenges of systematic biology. The recent …
history of species—remains one of the great challenges of systematic biology. The recent …
The global nitrogen cycle in the twenty-first century
…, JN Galloway, P Vitousek, A Leach… - … of the Royal …, 2013 - royalsocietypublishing.org
Global nitrogen fixation contributes 413 Tg of reactive nitrogen (N r ) to terrestrial and marine
ecosystems annually of which anthropogenic activities are responsible for half, 210 Tg N. …
ecosystems annually of which anthropogenic activities are responsible for half, 210 Tg N. …
An analysis of the attrition of drug candidates from four major pharmaceutical companies
The pharmaceutical industry remains under huge pressure to address the high attrition rates
in drug development. Attempts to reduce the number of efficacy- and safety-related failures …
in drug development. Attempts to reduce the number of efficacy- and safety-related failures …
Bayesian species delimitation in West African forest geckos (Hemidactylus fasciatus)
Genealogical data are an important source of evidence for delimiting species, yet few statistical
methods are available for calculating the probabilities associated with different species …
methods are available for calculating the probabilities associated with different species …
Species delimitation using genome-wide SNP data
The multispecies coalescent has provided important progress for evolutionary inferences,
including increasing the statistical rigor and objectivity of comparisons among competing …
including increasing the statistical rigor and objectivity of comparisons among competing …
Short tree, long tree, right tree, wrong tree: new acquisition bias corrections for inferring SNP phylogenies
AD Leaché, BL Banbury, J Felsenstein… - Systematic …, 2015 - academic.oup.com
Single nucleotide polymorphisms (SNPs) are useful markers for phylogenetic studies owing
in part to their ubiquity throughout the genome and ease of collection. Restriction site …
in part to their ubiquity throughout the genome and ease of collection. Restriction site …
[HTML][HTML] Late Cretaceous origin of the rice tribe provides evidence for early diversification in Poaceae
V Prasad, CAE Strömberg, AD Leaché… - Nature …, 2011 - nature.com
Rice and its relatives are a focal point in agricultural and evolutionary science, but a paucity
of fossils has obscured their deep-time history. Previously described cuticles with silica …
of fossils has obscured their deep-time history. Previously described cuticles with silica …
Molecular Systematics of the Eastern Fence Lizard (Sceloporus undulatus): A Comparison of Parsimony, Likelihood, and Bayesian Approaches
Phylogenetic analysis of large datasets using complex nucleotide substitution models under
a maximum likelihood framework can be computationally infeasible, especially when …
a maximum likelihood framework can be computationally infeasible, especially when …
Phylogenomics of phrynosomatid lizards: conflicting signals from sequence capture versus restriction site associated DNA sequencing
Sequence capture and restriction site associated DNA sequencing (RADseq) are popular
methods for obtaining large numbers of loci for phylogenetic analysis. These methods are …
methods for obtaining large numbers of loci for phylogenetic analysis. These methods are …
The ChEMBL database in 2017
…, G Papadatos, I Smit, AR Leach - Nucleic acids …, 2017 - academic.oup.com
ChEMBL is an open large-scale bioactivity database ( https://www.ebi.ac.uk/chembl ), previously
described in the 2012 and 2014 Nucleic Acids Research Database Issues. Since then, …
described in the 2012 and 2014 Nucleic Acids Research Database Issues. Since then, …