Molecular dynamics simulations: advances and applications

A Hospital, JR Goñi, M Orozco… - … and Applications in …, 2015 - Taylor & Francis
Molecular dynamics simulations have evolved into a mature technique that can be used
effectively to understand macromolecular structure-to-function relationships. Present simulation …

Parmbsc1: a refined force field for DNA simulations

…, PD Dans, A Noy, A Pérez, I Faustino, A Hospital… - Nature …, 2016 - nature.com
We present parmbsc1, a force field for DNA atomistic simulation, which has been
parameterized from high-level quantum mechanical data and tested for nearly 100 systems (…

MDWeb and MDMoby: an integrated web-based platform for molecular dynamics simulations

A Hospital, P Andrio, C Fenollosa, D Cicin-Sain… - …, 2012 - academic.oup.com
MDWeb and MDMoby constitute a web-based platform to help access to molecular dynamics
(MD) in the standard and high-throughput regime. The platform provides tools to prepare …

How accurate are accurate force-fields for B-DNA?

PD Dans, I Ivani, A Hospital, G Portella… - Nucleic Acids …, 2017 - academic.oup.com
Last generation of force-fields are raising expectations on the quality of molecular dynamics
(MD) simulations of DNA, as well as to the belief that theoretical models can substitute …

Long-timescale dynamics of the Drew–Dickerson dodecamer

…, I Ivani, T Dršata, F Lankaš, A Hospital… - Nucleic Acids …, 2016 - academic.oup.com
We present a systematic study of the long-timescale dynamics of the Drew–Dickerson
dodecamer (DDD: d(CGCGAATTGCGC) 2 ) a prototypical B-DNA duplex. Using our newly …

A consensus view of protein dynamics

…, A Pérez, J Camps, A Hospital… - Proceedings of the …, 2007 - National Acad Sciences
The dynamics of proteins in aqueous solution has been investigated through a massive
approach based on “state of the art” molecular dynamics simulations performed for all protein …

Hypophosphataemia and hyperphosphataemia in a hospital population

MG Betro, RW Pain - Br Med J, 1972 - bmj.com
One hundred cases of hypophosphataemia (≤ 2·0 mg/100 ml) and 84 cases of
hyperphosphataemia (≥ 5·0 mg/100 ml) occurring in a hospital population were studied in order to …

FlexServ: an integrated tool for the analysis of protein flexibility

…, O Carrillo, A Emperador, L Orellana, A Hospital… - …, 2009 - academic.oup.com
FlexServ is a web-based tool for the analysis of protein flexibility. The server incorporates
powerful protocols for the coarse-grained determination of protein dynamics using different …

Pseudoepidemics in hospital

RA Weinstein, WE Stamm - The Lancet, 1977 - Elsevier
20 (11%) of 181 nosocomial epidemics investigated by the Center for Disease Control
during 1956-75 were actually false outbreaks. In each pseudoepidemic, on-site investigation …

The impact of SARS-CoV-2 on the mental health of healthcare workers in a hospital setting—A Systematic Review

J Sanghera, N Pattani, Y Hashmi… - Journal of …, 2020 - academic.oup.com
… health outcomes of hospital-based HCWs and formulate recommendations for future action.
Hospitals should be staffed to meet service provision requirements and to mitigate the …