User profiles for A. Battle

Alexis Battle

- Verified email at jhu.edu - Cited by 34834

Andrew Battle

- Verified email at uq.edu.au - Cited by 1752

Where are the disease-associated eQTLs?

BD Umans, A Battle, Y Gilad - Trends in Genetics, 2021 - cell.com
Most disease-associated variants, although located in putatively regulatory regions, do not
have detectable effects on gene expression. One explanation could be that we have not …

The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans

…, PG Ferreira, H Ongen, MA Rivas, A Battle… - Science, 2015 - science.org
Understanding the functional consequences of genetic variation, and how it affects complex
human disease and quantitative traits, remains a critical challenge for biomedicine. We …

[HTML][HTML] The genotype-tissue expression (GTEx) project

…, R Guigo, J Monlong, M Sammeth, D Koller, A Battle… - Nature …, 2013 - nature.com
Genome-wide association studies have identified thousands of loci for common diseases,
but, for the majority of these, the mechanisms underlying disease susceptibility remain …

An update on contextual fear memory mechanisms: Transition between Amygdala and Hippocampus

N Chaaya, AR Battle, LR Johnson - Neuroscience & Biobehavioral …, 2018 - Elsevier
Context is an ever-present combination of discrete environmental elements capable of
influencing many psychological processes. When context is associated with an aversive stimulus, …

Efficient sparse coding algorithms

H Lee, A Battle, R Raina, A Ng - Advances in neural …, 2006 - proceedings.neurips.cc
Sparse coding provides a class of algorithms for finding succinct representations of stimuli;
given only unlabeled input data, it discovers basis functions that capture higher-level features …

Large-scale cis- and trans-eQTL analyses identify thousands of genetic loci and polygenic scores that regulate blood gene expression

…, WH Ouwehand, K Downes, O Stegle, A Battle… - Nature …, 2021 - nature.com
Trait-associated genetic variants affect complex phenotypes primarily via regulatory mechanisms
on the transcriptome. To investigate the genetics of gene expression, we performed cis…

Molecular quantitative trait loci

F Aguet, K Alasoo, YI Li, A Battle, HK Im… - Nature Reviews …, 2023 - nature.com
Understanding functional effects of genetic variants is one of the key challenges in human
genetics, as much of disease-associated variation is located in non-coding regions with …

Self-taught learning: transfer learning from unlabeled data

R Raina, A Battle, H Lee, B Packer, AY Ng - Proceedings of the 24th …, 2007 - dl.acm.org
We present a new machine learning framework called "self-taught learning" for using
unlabeled data in supervised classification tasks. We do not assume that the unlabeled data …

Social supports from teachers and peers as predictors of academic and social motivation

KR Wentzel, A Battle, SL Russell, LB Looney - Contemporary educational …, 2010 - Elsevier
Young adolescents’ perceptions of teachers’ and peers’ multiple classroom supports were
examined in relation to motivational outcomes (interest and social goal pursuit). Responses …

Characterizing the genetic basis of transcriptome diversity through RNA-sequencing of 922 individuals

A Battle, S Mostafavi, X Zhu, JB Potash… - Genome …, 2014 - genome.cshlp.org
Understanding the consequences of regulatory variation in the human genome remains a
major challenge, with important implications for understanding gene regulation and …