User profiles for A. Artyomenko
Alexander ArtyomenkoBioinformatics Scientist at Guardant Health Inc. Verified email at guardanthealth.com Cited by 425 |
Validation of microsatellite instability detection using a comprehensive plasma-based genotyping panel
J Willis, MI Lefterova, A Artyomenko, PM Kasi… - Clinical Cancer …, 2019 - AACR
Purpose: To analytically and clinically validate microsatellite instability (MSI) detection using
cell-free DNA (cfDNA) sequencing. Experimental Design: Pan-cancer MSI detection using …
cell-free DNA (cfDNA) sequencing. Experimental Design: Pan-cancer MSI detection using …
Accurate assembly of minority viral haplotypes from next-generation sequencing through efficient noise reduction
…, A Shankar, A Melnyk, A Artyomenko… - Nucleic acids …, 2021 - academic.oup.com
Rapidly evolving RNA viruses continuously produce minority haplotypes that can become
dominant if they are drug-resistant or can better evade the immune system. Therefore, early …
dominant if they are drug-resistant or can better evade the immune system. Therefore, early …
[HTML][HTML] Diagnosis and treatment of migraine: Russian experts' recommendations
…, ER Lebedeva, AR Artyomenko… - Neurology …, 2020 - nnp.ima-press.net
Migraine is one of the most common types of headache, which can lead to a significant
decrease in quality of life. Researchers identify migraine with aura, migraine without aura, and …
decrease in quality of life. Researchers identify migraine with aura, migraine without aura, and …
[HTML][HTML] The Fibrodysplasia ossificans Progressiva physical function questionnaire (FOP-PFQ): a patient-reported, disease-specific measure
…, M Kimel, J Whalen, AK Kawata, A Artyomenko… - Bone, 2023 - Elsevier
Objectives To assess the reliability and validity of age-specific versions of the Fibrodysplasia
Ossificans Progressiva Physical Function Questionnaire (FOP-PFQ), developed to measure …
Ossificans Progressiva Physical Function Questionnaire (FOP-PFQ), developed to measure …
[HTML][HTML] Inference of genetic relatedness between viral quasispecies from sequencing data
Background RNA viruses such as HCV and HIV mutate at extremely high rates, and as a
result, they exist in infected hosts as populations of genetically related variants. Recent …
result, they exist in infected hosts as populations of genetically related variants. Recent …
Long single-molecule reads can resolve the complexity of the influenza virus composed of rare, closely related mutant variants
As a result of a high rate of mutations and recombination events, an RNA-virus exists as a
heterogeneous “swarm” of mutant variants. The long read length offered by single-molecule …
heterogeneous “swarm” of mutant variants. The long read length offered by single-molecule …
Cliquesnv: Scalable reconstruction of intra-host viral populations from ngs reads
Highly mutable RNA viruses such as influenza A virus, human immunodeficiency virus and
hepatitis C virus exist in infected hosts as highly heterogeneous populations of closely …
hepatitis C virus exist in infected hosts as highly heterogeneous populations of closely …
Evaluation and treatment of medication-overuse headache: Russian experts' guidelines
…, YE Azimova, AV Amelin, AR Artyomenko… - Neurology …, 2022 - nnp.ima-press.net
The Russian experts’ guidelines on evaluation and treatment of medication-overuse
headache are based on evidence-based medicine, the latest revision of the International …
headache are based on evidence-based medicine, the latest revision of the International …
[HTML][HTML] Reconstruction of viral population structure from next-generation sequencing data using multicommodity flows
Background Highly mutable RNA viruses exist in infected hosts as heterogeneous populations
of genetically close variants known as quasispecies. Next-generation sequencing (NGS) …
of genetically close variants known as quasispecies. Next-generation sequencing (NGS) …
Reactions of 2-Nitro-1H-benzo[f]chromenes and 3-Nitro-1-benzofurans with Nucleophiles
DV Osipov, AA Artyomenko, KS Korzhenko… - Russian Journal of …, 2023 - Springer
2-Nitro-1H-benzo[f]chromenes reacted with alcohols to give a series of 3-alkoxy-2-nitro-2,3-dihydro-1H-benzo[f]chromenes
as mixtures of cis and trans isomers. The reaction of 2-nitro-…
as mixtures of cis and trans isomers. The reaction of 2-nitro-…