[HTML][HTML] Minimizing errors in RT-PCR detection and quantification of SARS-CoV-2 RNA for wastewater surveillance
Wastewater surveillance for pathogens using reverse transcription-polymerase chain reaction
(RT-PCR) is an effective and resource-efficient tool for gathering community-level public …
(RT-PCR) is an effective and resource-efficient tool for gathering community-level public …
Have genetic targets for faecal pollution diagnostics and source tracking revolutionized water quality analysis yet?
…, JB Rose, W Ahmed, AH Farnleitner - FEMS Microbiology …, 2023 - academic.oup.com
The impacts of nucleic acid-based methods - such as PCR and sequencing - to detect and
analyze indicators, genetic markers or molecular signatures of microbial faecal pollution in …
analyze indicators, genetic markers or molecular signatures of microbial faecal pollution in …
[HTML][HTML] Host diet and evolutionary history explain different aspects of gut microbiome diversity among vertebrate clades
Multiple factors modulate microbial community assembly in the vertebrate gut, though studies
disagree as to their relative contribution. One cause may be a reliance on captive animals, …
disagree as to their relative contribution. One cause may be a reliance on captive animals, …
[HTML][HTML] Challenges and perspectives in the application of isothermal DNA amplification methods for food and water analysis
Molecular diagnostic tools in the field of food and water quality analysis are becoming
increasingly widespread. Usually, based on DNA amplification techniques such as polymerase …
increasingly widespread. Usually, based on DNA amplification techniques such as polymerase …
Bacterial diversity along a 2600 km river continuum
…, AKT Kirschner, AH Farnleitner… - Environmental …, 2015 - Wiley Online Library
The bacterioplankton diversity in large rivers has thus far been under‐sampled despite the
importance of streams and rivers as components of continental landscapes. Here, we present …
importance of streams and rivers as components of continental landscapes. Here, we present …
Quantitative PCR method for sensitive detection of ruminant fecal pollution in freshwater and evaluation of this method in alpine karstic regions
…, R Steinborn, RL Mach, AH Farnleitner - Applied and …, 2006 - Am Soc Microbiol
A quantitative TaqMan minor-groove binder real-time PCR assay was developed for the
sensitive detection of a ruminant-specific genetic marker in fecal members of the phylum …
sensitive detection of a ruminant-specific genetic marker in fecal members of the phylum …
A quantitative real‐time PCR assay for the highly sensitive and specific detection of human faecal influence in spring water from a large alpine catchment area
…, DC Kasper, R Steinborn, AH Farnleitner… - Letters in applied …, 2007 - academic.oup.com
Aims: The aim of the study was the development of a sensitive human‐specific quantitative
real‐time PCR assay for microbial faecal source tracking (MST) in alpine spring water. The …
real‐time PCR assay for microbial faecal source tracking (MST) in alpine spring water. The …
Bacterial dynamics in spring water of alpine karst aquifers indicates the presence of stable autochthonous microbial endokarst communities
AH Farnleitner, I Wilhartitz, G Ryzinska… - Environmental …, 2005 - Wiley Online Library
… This scenario is supported by monthly determined DOC values during winter 2003/04 from
December to June (AH Farnleitner and RL Mach, unpublished results). Dissolved organic …
December to June (AH Farnleitner and RL Mach, unpublished results). Dissolved organic …
Determination of Escherichia coli Contamination with Chromocult Coliform Agar Showed a High Level of Discrimination Efficiency for Differing Fecal Pollution Levels …
…, F Kansiime, RL Mach, AH Farnleitner - Applied and …, 2000 - Am Soc Microbiol
Escherichia coli, total coliforms, fecal coliforms, and sulfite-reducing anaerobic spore formers
from different polluted sites in a tropical environment were determined in order to test for …
from different polluted sites in a tropical environment were determined in order to test for …
Performance of human fecal anaerobe-associated PCR-based assays in a multi-laboratory method evaluation study
…, M Byappanahalli, R Converse, AH Farnleitner… - Water Research, 2013 - Elsevier
A number of PCR-based methods for detecting human fecal material in environmental
waters have been developed over the past decade, but these methods have rarely received …
waters have been developed over the past decade, but these methods have rarely received …