User profiles for A. D. Jayaprakash

Anitha Jayaprakash

Girihlet Inc
Verified email at girihlet.com
Cited by 1581

High-throughput assessment of microRNA activity and function using microRNA sensor and decoy libraries

G Mullokandov, A Baccarini, A Ruzo, AD Jayaprakash… - Nature …, 2012 - nature.com
We introduce two large-scale resources for functional analysis of microRNA (miRNA): a decoy
library for inhibiting miRNA function and a sensor library for monitoring microRNA activity. …

Identification and remediation of biases in the activity of RNA ligases in small-RNA deep sequencing

AD Jayaprakash, O Jabado, BD Brown… - Nucleic acids …, 2011 - academic.oup.com
Deep sequencing of small RNAs (sRNA-seq) is now the gold standard for small RNA
profiling and discovery. Biases in sRNA-seq have been reported, but their etiology remains …

[PDF][PDF] Kinetic analysis reveals the fate of a microRNA following target regulation in mammalian cells

A Baccarini, H Chauhan, TJ Gardner, AD Jayaprakash… - Current biology, 2011 - cell.com
Considerable details about microRNA (miRNA) biogenesis and regulation have been uncovered,
but little is known about the fate of the miRNA subsequent to target regulation. To gain …

Stable heteroplasmy at the single-cell level is facilitated by intercellular exchange of mtDNA

AD Jayaprakash, EK Benson, S Gone… - Nucleic acids …, 2015 - academic.oup.com
Eukaryotic cells carry two genomes, nuclear (nDNA) and mitochondrial (mtDNA), which are
ostensibly decoupled in their replication, segregation and inheritance. It is increasingly …

YES1 amplification is a mechanism of acquired resistance to EGFR inhibitors identified by transposon mutagenesis and clinical genomics

PD Fan, G Narzisi, AD Jayaprakash… - Proceedings of the …, 2018 - National Acad Sciences
In ∼30% of patients with EGFR-mutant lung adenocarcinomas whose disease progresses
on EGFR inhibitors, the basis for acquired resistance remains unclear. We have integrated …

[PDF][PDF] Tbx3 controls Dppa3 levels and exit from pluripotency toward mesoderm

A Waghray, N Saiz, AD Jayaprakash, AG Freire… - Stem cell reports, 2015 - cell.com
Tbx3, a member of the T-box family, plays important roles in development, stem cells, nuclear
reprogramming, and cancer. Loss of Tbx3 induces differentiation in mouse embryonic stem …

[HTML][HTML] Accessible LAMP-enabled rapid test (ALERT) for detecting SARS-CoV-2

…, AB Lindner, F Federici, AD Jayaprakash - Viruses, 2021 - mdpi.com
The coronavirus disease 2019 (COVID-19) pandemic has highlighted bottlenecks in large-scale,
frequent testing of populations for infections. Polymerase chain reaction (PCR)-based …

Embryonic stem cells: from markers to market

KD Deb, AD Jayaprakash, V Sharma… - Rejuvenation …, 2008 - liebertpub.com
… Efforts are now underway to harness embryonic stem cells and to take advantage of this
promising capability, with the goal of devising new and more effective treatments for a host of …

Next generation sequencing of the pig αβ TCR repertoire identifies the porcine invariant NKT cell receptor

…, BL Artiaga, CL Lomelino, AD Jayaprakash… - The Journal of …, 2019 - journals.aai.org
Swine represent the only livestock with an established invariant NKT (iNKT) cell–CD1d
system. In this study, we exploited the fact that pig iNKT cells can be purified using a mouse …

Transposon mutagenesis in Mycobacterium kansasii links a small RNA gene to colony morphology and biofilm formation and identifies 9,885 intragenic insertions …

…, Z McKie‐Krisberg, AD Jayaprakash… - …, 2020 - Wiley Online Library
Mycobacterium kansasii (Mk) is a resilient opportunistic human pathogen that causes
tuberculosis‐like chronic pulmonary disease and mortality stemming from comorbidities and …