[BOOK][B] In all likelihood: statistical modelling and inference using likelihood

Y Pawitan - 2001 - books.google.com
Based on a course in the theory of statistics this text concentrates on what can be achieved
using the likelihood/Fisherian method of taking account of uncertainty when studying a …

False discovery rate, sensitivity and sample size for microarray studies

Y Pawitan, S Michiels, S Koscielny, A Gusnanto… - …, 2005 - academic.oup.com
Motivation: In microarray data studies most researchers are keenly aware of the potentially
high rate of false positives and the need to control it. One key statistical shift is the move away …

Most genetic risk for autism resides with common variation

…, AB Lee, M Mahajan, D Manaa, Y Pawitan… - Nature …, 2014 - nature.com
A key component of genetic architecture is the allelic spectrum influencing trait variability.
For autism spectrum disorder (herein termed autism), the nature of the allelic spectrum is …

Common genetic determinants of schizophrenia and bipolar disorder in Swedish families: a population-based study

P Lichtenstein, BH Yip, C Björk, Y Pawitan, TD Cannon… - The Lancet, 2009 - thelancet.com
Background Whether schizophrenia and bipolar disorder are the clinical outcomes of discrete
or shared causative processes is much debated in psychiatry. We aimed to assess genetic …

[HTML][HTML] Gene expression profiling spares early breast cancer patients from adjuvant therapy: derived and validated in two population-based cohorts

Y Pawitan, J Bjöhle, L Amler, AL Borg, S Egyhazi… - Breast cancer …, 2005 - Springer
Introduction Adjuvant breast cancer therapy significantly improves survival, but overtreatment
and undertreatment are major problems. Breast cancer expression profiling has so far …

Statistical challenges associated with detecting copy number variations with next-generation sequencing

SM Teo, Y Pawitan, CS Ku, KS Chia, A Salim - Bioinformatics, 2012 - academic.oup.com
Motivation: Analysing next-generation sequencing (NGS) data for copy number variations (CNVs)
detection is a relatively new and challenging field, with no accepted standard …

An expression signature for p53 status in human breast cancer predicts mutation status, transcriptional effects, and patient survival

…, L Vergara, A Ploner, Y Pawitan… - Proceedings of the …, 2005 - National Acad Sciences
Perturbations of the p53 pathway are associated with more aggressive and therapeutically
refractory tumors. However, molecular assessment of p53 status, by using sequence analysis …

[BOOK][B] Generalized linear models with random effects: unified analysis via H-likelihood

Y Lee, JA Nelder, Y Pawitan - 2018 - taylorfrancis.com
This is the second edition of a monograph on generalized linear models with random effects
that extends the classic work of McCullagh and Nelder. It has been thoroughly updated, with …

Genetic reclassification of histologic grade delineates new clinical subtypes of breast cancer

…, B Mow, TC Putti, J Smeds, T Lindahl, Y Pawitan… - Cancer research, 2006 - AACR
Histologic grading of breast cancer defines morphologic subtypes informative of metastatic
potential, although not without considerable interobserver disagreement and clinical …

An interferon-related gene signature for DNA damage resistance is a predictive marker for chemotherapy and radiation for breast cancer

…, B Roizman, J Bergh, Y Pawitan… - Proceedings of the …, 2008 - National Acad Sciences
Individualization of cancer management requires prognostic markers and therapy-predictive
markers. Prognostic markers assess risk of disease progression independent of therapy, …