User profiles for Tom van der Valk
Tom van der ValkCentre for Palaeogenetics, Sweden Verified email at nrm.se Cited by 1310 |
Million-year-old DNA sheds light on the genomic history of mammoths
Temporal genomic data hold great potential for studying evolutionary processes such as
speciation. However, sampling across speciation events would, in many cases, require …
speciation. However, sampling across speciation events would, in many cases, require …
[PDF][PDF] Historical genomes reveal the genomic consequences of recent population decline in eastern gorillas
Many endangered species have experienced severe population declines within the last
centuries [1, 2]. However, despite concerns about negative fitness effects resulting from …
centuries [1, 2]. However, despite concerns about negative fitness effects resulting from …
Genomic evidence for inbreeding depression and purging of deleterious genetic variation in Indian tigers
…, A Viswanathan, T van der Valk… - Proceedings of the …, 2021 - National Acad Sciences
Increasing habitat fragmentation leads to wild populations becoming small, isolated, and
threatened by inbreeding depression. However, small populations may be able to purge …
threatened by inbreeding depression. However, small populations may be able to purge …
Index hopping on the Illumina HiseqX platform and its consequences for ancient DNA studies
T van der Valk, F Vezzi, M Ormestad… - Molecular ecology …, 2020 - Wiley Online Library
The high‐throughput capacities of the Illumina sequencing platforms and the possibility to
label samples individually have encouraged wide use of sample multiplexing. However, this …
label samples individually have encouraged wide use of sample multiplexing. However, this …
[HTML][HTML] Genomic insights into the conservation status of the world's last remaining Sumatran rhinoceros populations
Small populations are often exposed to high inbreeding and mutational load that can increase
the risk of extinction. The Sumatran rhinoceros was widespread in Southeast Asia, but is …
the risk of extinction. The Sumatran rhinoceros was widespread in Southeast Asia, but is …
[PDF][PDF] Population genomics of the critically endangered kākāpō
The kākāpō is a flightless parrot endemic to New Zealand. Once common in the archipelago,
only 201 individuals remain today, most of them descending from an isolated island …
only 201 individuals remain today, most of them descending from an isolated island …
[PDF][PDF] Ancient and modern genomes unravel the evolutionary history of the rhinoceros family
Only five species of the once-diverse Rhinocerotidae remain, making the reconstruction of
their evolutionary history a challenge to biologists since Darwin. We sequenced genomes …
their evolutionary history a challenge to biologists since Darwin. We sequenced genomes …
[PDF][PDF] Genomics of adaptive evolution in the woolly mammoth
Ancient genomes provide a tool to investigate the genetic basis of adaptations in extinct
organisms. However, the identification of species-specific fixed genetic variants requires the …
organisms. However, the identification of species-specific fixed genetic variants requires the …
[HTML][HTML] GenErode: a bioinformatics pipeline to investigate genome erosion in endangered and extinct species
… Tom van der Valk … 46.van der Valk T, de Manuel M, Marques-Bonet T, Guschanski K.
Estimates of genetic load in small populations suggest extensive purging of … Tom van der Valk …
Estimates of genetic load in small populations suggest extensive purging of … Tom van der Valk …
[HTML][HTML] aMeta: an accurate and memory-efficient ancient metagenomic profiling workflow
Abstract Analysis of microbial data from archaeological samples is a growing field with great
potential for understanding ancient environments, lifestyles, and diseases. However, high …
potential for understanding ancient environments, lifestyles, and diseases. However, high …