User profiles for Samuel Bowerman

Samuel Bowerman

Scientist, Structural Biology, Loxo Oncology at Lilly
Verified email at loxooncology.com
Cited by 510

The conformation of the histone H3 tail inhibits association of the BPTF PHD finger with the nucleosome

EA Morrison, S Bowerman, KL Sylvers… - Elife, 2018 - elifesciences.org
10.7554/eLife.31481.001 Histone tails harbor a plethora of post-translational modifications
that direct the function of chromatin regulators, which recognize them through effector …

[PDF][PDF] Virus-encoded histone doublets are essential and form nucleosome-like structures

…, CM Toner, S Jeudy, N Philippe, K Zhou, S Bowerman… - Cell, 2021 - cell.com
The organization of genomic DNA into defined nucleosomes has long been viewed as a
hallmark of eukaryotes. This paradigm has been challenged by the identification of "minimalist" …

Archaeal chromatin 'slinkies' are inherently dynamic complexes with deflected DNA wrapping pathways

S Bowerman, J Wereszczynski, K Luger - Elife, 2021 - elifesciences.org
Eukaryotes and many archaea package their DNA with histones. While the four eukaryotic
histones wrap ~147 DNA base pairs into nucleosomes, archaeal histones form ‘nucleosome-…

Analytical ultracentrifugation (AUC): an overview of the application of fluorescence and absorbance AUC to the study of biological macromolecules

…, UM Muthurajan, S Bowerman… - Current protocols in …, 2020 - Wiley Online Library
The biochemical and biophysical investigation of proteins, nucleic acids, and the assemblies
that they form yields essential information to understand complex systems. Analytical …

[PDF][PDF] Effects of MacroH2A and H2A. Z on nucleosome dynamics as elucidated by molecular dynamics simulations

S Bowerman, J Wereszczynski - Biophysical journal, 2016 - cell.com
Eukaryotes tune the transcriptional activity of their genome by altering the nucleosome core
particle through multiple chemical processes. In particular, replacement of the canonical …

[HTML][HTML] Bridging of nucleosome-proximal DNA double-strand breaks by PARP2 enhances its interaction with HPF1

G Gaullier, G Roberts, UM Muthurajan, S Bowerman… - PLoS …, 2020 - journals.plos.org
Poly(ADP-ribose) Polymerase 2 (PARP2) is one of three DNA-dependent PARPs involved
in the detection of DNA damage. Upon binding to DNA double-strand breaks, PARP2 uses …

Archaea: the final frontier of chromatin

SP Laursen, S Bowerman, K Luger - Journal of molecular biology, 2021 - Elsevier
The three domains of life employ various strategies to organize their genomes. Archaea utilize
features similar to those found in both eukaryotic and bacterial chromatin to organize their …

[PDF][PDF] Dynamics of endogenous PARP1 and PARP2 during DNA damage revealed by live-cell single-molecule imaging

J Mahadevan, A Jha, J Rudolph, S Bowerman… - IScience, 2023 - cell.com
PARP1 contributes to genome architecture and DNA damage repair through its dynamic
association with chromatin. PARP1 and PARP2 (PARP1/2) recognize damaged DNA and …

Determining atomistic SAXS models of tri-ubiquitin chains from bayesian analysis of accelerated molecular dynamics simulations

S Bowerman, ASJB Rana, A Rice… - Journal of chemical …, 2017 - ACS Publications
Small-angle X-ray scattering (SAXS) has become an increasingly popular technique for
characterizing the solution ensemble of flexible biomolecules. However, data resulting from …

Unique Dynamics in Asymmetric macroH2A–H2A Hybrid Nucleosomes Result in Increased Complex Stability

S Bowerman, RJ Hickok… - The Journal of Physical …, 2018 - ACS Publications
The fundamental unit of eukaryotic chromatin is the nucleosome core particle, a protein/DNA
complex that binds ∼147 base pairs of DNA to a histone octamer. These histones—H3, H4, …