[PDF][PDF] Multilayer omics analysis reveals a non-classical retinoic acid signaling axis that regulates hematopoietic stem cell identity

…, MC Romero-Mulero, P Cauchy, J Mess, PV Pavlovich… - Cell stem cell, 2022 - cell.com
Hematopoietic stem cells (HSCs) rely on complex regulatory networks to preserve stemness.
Due to the scarcity of HSCs, technical challenges have limited our insights into the interplay …

[PDF][PDF] Prenatal inflammation perturbs murine fetal hematopoietic development and causes persistent changes to postnatal immunity

…, CH Valencia, MC Romero-Mulero, PV Pavlovich… - Cell reports, 2022 - cell.com
Adult hematopoietic stem and progenitor cells (HSPCs) respond directly to inflammation
and infection, causing both acute and persistent changes to quiescence, mobilization, and …

[HTML][HTML] Single-cell transcriptomics identifies CD44 as a marker and regulator of endothelial to haematopoietic transition

…, K Ganter, K Zirngibl, PV Pavlovich… - Nature …, 2020 - nature.com
The endothelial to haematopoietic transition (EHT) is the process whereby haemogenic
endothelium differentiates into haematopoietic stem and progenitor cells (HSPCs). The …

Sequences to Differences in Gene Expression: Analysis of RNA-Seq Data

PV Pavlovich, P Cauchy - Cancer Cell Biology: Methods and Protocols, 2022 - Springer
RNA-Seq is now a routinely employed assay to measure gene expression. As the technique
matured over the last decade, so have dedicated analytic tools. In this chapter, we first …

Single-cell atlas of major haematopoietic tissues sheds light on blood cell formation from embryonic endothelium

M Shvartsman, PV Pavlovich, M Oatley, K Ganter… - bioRxiv, 2019 - biorxiv.org
The Yolk Sac (YS) and Aorta-Gonad-Mesonephros (AGM) are two major haematopoietic
regions during embryonic development. Interestingly, AGM is the only one generating …

Single-cell transcriptomics identifies CD44 as a new marker and regulator of haematopoietic stem cells development

…, M Shvartsman, K Ganter, K Zirngibl, PV Pavlovich… - bioRxiv, 2018 - biorxiv.org
The endothelial to haematopoietic transition (EHT) is the process whereby haemogenic
endothelium differentiates into haematopoietic stem and progenitor cells (HSPCs). The …

[HTML][HTML] Peptidomics dataset: Blood plasma and serum samples of healthy donors fractionated on a set of chromatography sorbents

…, O Ivanova, I Butenko, T Saveleva, P Pavlovich… - Data in brief, 2018 - Elsevier
Blood as connective tissue potentially contains evidence of all processes occurring within
the organism, at least in trace amounts (Petricoin et al., 2006) [1]. Because of their small size, …

Prenatal inflammation perturbs fetal hematopoietic development and causes persistent changes to postnatal immunity

…, CH Valencia, MC Romero-Mulero, P Pavlovich… - bioRxiv, 2022 - biorxiv.org
Adult hematopoietic stem and progenitor cells (HSPCs) respond directly to inflammation and
infection, resulting in both acute and persistent changes to quiescence, mobilization, and …

Unveiling heterogeneity of cancer-associated fibroblasts (CAFs) across multiple solid cancer types

…, F Grigoryev, I Bulusheva, B Sargsyan, P Pavlovich… - Cancer Research, 2024 - AACR
Background: Stromal cells, including CAFs, are a heterogeneous group of cells in the tumor
microenvironment. Many models describe their heterogeneity like the classification into 3 …

3121–IDENTIFICATION OF METABOLIC-EPIGENETIC HUBS REGULATING HEMATOPOIETIC STEM CELL FUNCTION

…, MC Romero-Mulero, P Cauchy, P Pavlovich… - Experimental …, 2021 - Elsevier
Hematopoietic stem cells (HSCs) hold the unique capacity to long-term reconstitute the entire
blood system. Metabolic, epigenetic and transcriptional drivers form complex regulatory …