User profiles for Anna K. Fotakis

Anna K Fotakis

University of Copenhagen
Verified email at bio.ku.dk
Cited by 1308

Population genomics of the Viking world

…, G Renaud, C Bhérer, JV Moreno-Mayar, AK Fotakis… - Nature, 2020 - nature.com
The maritime expansion of Scandinavian populations during the Viking Age (about ad 750–1050)
was a far-flung transformation in world history 1, 2. Here we sequenced the genomes …

Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny

…, D Samodova, PL Rüther, AK Fotakis… - Nature, 2019 - nature.com
The sequencing of ancient DNA has enabled the reconstruction of speciation, migration and
admixture events for extinct taxa 1 . However, the irreversible post-mortem degradation 2 of …

[HTML][HTML] A 5700 year-old human genome and oral microbiome from chewed birch pitch

TZT Jensen, J Niemann, KH Iversen, AK Fotakis… - Nature …, 2019 - nature.com
The rise of ancient genomics has revolutionised our understanding of human prehistory but
this work depends on the availability of suitable samples. Here we present a complete …

[PDF][PDF] Pan-genome analysis of ancient and modern Salmonella enterica demonstrates genomic stability of the invasive para C lineage for millennia

…, NF Alikhan, MJ Sergeant, G Langridge, AK Fotakis… - Current Biology, 2018 - cell.com
Salmonella enterica serovar Paratyphi C causes enteric (paratyphoid) fever in humans. Its
presentation can range from asymptomatic infections of the blood stream to gastrointestinal or …

[HTML][HTML] Quantitative metaproteomics of medieval dental calculus reveals individual oral health status

…, M Mackie, D Belstrøm, CD Kelstrup, AK Fotakis… - Nature …, 2018 - nature.com
The composition of ancient oral microbiomes has recently become accessible owing to
advanced biomolecular methods such as metagenomics and metaproteomics, but the utility of …

Proteomic profiling of archaeological human bone

…, T Nagaoka, AK Fotakis… - Royal Society …, 2017 - royalsocietypublishing.org
Ancient protein analysis provides clues to human life and diseases from ancient times. Here,
we performed shotgun proteomics of human archeological bones for the first time, using rib …

Multi-omic detection of Mycobacterium leprae in archaeological human dental calculus

AK Fotakis, SD Denham, M Mackie… - … of the Royal …, 2020 - royalsocietypublishing.org
Mineralized dental plaque (calculus) has proven to be an excellent source of ancient
biomolecules. Here we present a Mycobacterium leprae genome (6.6-fold), the causative agent of …

[PDF][PDF] The population genomic legacy of the second plague pandemic

…, D Juan, P Gelabert, T De-Dios, AK Fotakis… - Current Biology, 2022 - cell.com
Human populations have been shaped by catastrophes that may have left long-lasting
signatures in their genomes. One notable example is the second plague pandemic that entered …

Ancient metagenomic studies: considerations for the wider scientific community

C Der Sarkissian, IM Velsko, AK Fotakis, ÅJ Vågene… - Msystems, 2021 - Am Soc Microbiol
Like modern metagenomics, ancient metagenomics is a highly data-rich discipline, with the
added challenge that the DNA of interest is degraded and, depending on the sample type, in …

[HTML][HTML] Genomic ancestry, diet and microbiomes of Upper Palaeolithic hunter-gatherers from San Teodoro cave

…, M Mackie, A Margaryan, AK Fotakis… - Communications …, 2022 - nature.com
Recent improvements in the analysis of ancient biomolecules from human remains and
associated dental calculus have provided new insights into the prehistoric diet and genetic …