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Year Number of Results
2014 1
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Page 1
The Scientific Filesystem.
Sochat V. Sochat V. Gigascience. 2018 May 1;7(5):giy023. doi: 10.1093/gigascience/giy023. Gigascience. 2018. PMID: 29718213 Free PMC article.
Sustainable data analysis with Snakemake.
Mölder F, Jablonski KP, Letcher B, Hall MB, Tomkins-Tinch CH, Sochat V, Forster J, Lee S, Twardziok SO, Kanitz A, Wilm A, Holtgrewe M, Rahmann S, Nahnsen S, Köster J. Mölder F, et al. Among authors: sochat v. F1000Res. 2021 Jan 18;10:33. doi: 10.12688/f1000research.29032.2. eCollection 2021. F1000Res. 2021. PMID: 34035898 Free PMC article.
Global analysis of the yeast knockout phenome.
Turco G, Chang C, Wang RY, Kim G, Stoops EH, Richardson B, Sochat V, Rust J, Oughtred R, Thayer N, Kang F, Livstone MS, Heinicke S, Schroeder M, Dolinski KJ, Botstein D, Baryshnikova A. Turco G, et al. Among authors: sochat v. Sci Adv. 2023 May 26;9(21):eadg5702. doi: 10.1126/sciadv.adg5702. Epub 2023 May 26. Sci Adv. 2023. PMID: 37235661 Free article.
Ten simple rules for writing Dockerfiles for reproducible data science.
Nüst D, Sochat V, Marwick B, Eglen SJ, Head T, Hirst T, Evans BD. Nüst D, et al. Among authors: sochat v. PLoS Comput Biol. 2020 Nov 10;16(11):e1008316. doi: 10.1371/journal.pcbi.1008316. eCollection 2020 Nov. PLoS Comput Biol. 2020. PMID: 33170857 Free PMC article.
Singularity: Scientific containers for mobility of compute.
Kurtzer GM, Sochat V, Bauer MW. Kurtzer GM, et al. Among authors: sochat v. PLoS One. 2017 May 11;12(5):e0177459. doi: 10.1371/journal.pone.0177459. eCollection 2017. PLoS One. 2017. PMID: 28494014 Free PMC article.
Predicting Prostate Cancer Recurrence After Radical Prostatectomy.
Jeffers A, Sochat V, Kattan MW, Yu C, Melcon E, Yamoah K, Rebbeck TR, Whittemore AS. Jeffers A, et al. Among authors: sochat v. Prostate. 2017 Feb;77(3):291-298. doi: 10.1002/pros.23268. Epub 2016 Oct 24. Prostate. 2017. PMID: 27775165 Free PMC article.
The Experiment Factory: Standardizing Behavioral Experiments.
Sochat VV, Eisenberg IW, Enkavi AZ, Li J, Bissett PG, Poldrack RA. Sochat VV, et al. Front Psychol. 2016 Apr 26;7:610. doi: 10.3389/fpsyg.2016.00610. eCollection 2016. Front Psychol. 2016. PMID: 27199843 Free PMC article.
Long-term neural and physiological phenotyping of a single human.
Poldrack RA, Laumann TO, Koyejo O, Gregory B, Hover A, Chen MY, Gorgolewski KJ, Luci J, Joo SJ, Boyd RL, Hunicke-Smith S, Simpson ZB, Caven T, Sochat V, Shine JM, Gordon E, Snyder AZ, Adeyemo B, Petersen SE, Glahn DC, Reese Mckay D, Curran JE, Göring HH, Carless MA, Blangero J, Dougherty R, Leemans A, Handwerker DA, Frick L, Marcotte EM, Mumford JA. Poldrack RA, et al. Among authors: sochat v. Nat Commun. 2015 Dec 9;6:8885. doi: 10.1038/ncomms9885. Nat Commun. 2015. PMID: 26648521 Free PMC article.
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