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Page 1
Mutation effects predicted from sequence co-variation.
Nat Biotechnol. 2017 Feb;35(2):128-135. doi: 10.1038/nbt.3769. Epub 2017 Jan 16.
Nat Biotechnol. 2017.
PMID: 28092658
Free PMC article.
Genetic variation in human drug-related genes.
Schärfe CPI, Tremmel R, Schwab M, Kohlbacher O, Marks DS.
Schärfe CPI, et al.
Genome Med. 2017 Dec 22;9(1):117. doi: 10.1186/s13073-017-0502-5.
Genome Med. 2017.
PMID: 29273096
Free PMC article.
Item in Clipboard
The EVcouplings Python framework for coevolutionary sequence analysis.
Hopf TA, Green AG, Schubert B, Mersmann S, Schärfe CPI, Ingraham JB, Toth-Petroczy A, Brock K, Riesselman AJ, Palmedo P, Kang C, Sheridan R, Draizen EJ, Dallago C, Sander C, Marks DS.
Hopf TA, et al. Among authors: scharfe cpi.
Bioinformatics. 2019 May 1;35(9):1582-1584. doi: 10.1093/bioinformatics/bty862.
Bioinformatics. 2019.
PMID: 30304492
Free PMC article.
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ClinVAP: a reporting strategy from variants to therapeutic options.
Sürün B, Schärfe CPI, Divine MR, Heinrich J, Toussaint NC, Zimmermann L, Beha J, Kohlbacher O.
Sürün B, et al. Among authors: scharfe cpi.
Bioinformatics. 2020 Apr 1;36(7):2316-2317. doi: 10.1093/bioinformatics/btz924.
Bioinformatics. 2020.
PMID: 31830259
Free PMC article.
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Sequence co-evolution gives 3D contacts and structures of protein complexes.
Hopf TA, Schärfe CP, Rodrigues JP, Green AG, Kohlbacher O, Sander C, Bonvin AM, Marks DS.
Hopf TA, et al. Among authors: scharfe cp.
Elife. 2014 Sep 25;3:e03430. doi: 10.7554/eLife.03430.
Elife. 2014.
PMID: 25255213
Free PMC article.
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Antiparallel protocadherin homodimers use distinct affinity- and specificity-mediating regions in cadherin repeats 1-4.
Nicoludis JM, Vogt BE, Green AG, Schärfe CP, Marks DS, Gaudet R.
Nicoludis JM, et al. Among authors: scharfe cp.
Elife. 2016 Jul 29;5:e18449. doi: 10.7554/eLife.18449.
Elife. 2016.
PMID: 27472898
Free PMC article.
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Structure and Sequence Analyses of Clustered Protocadherins Reveal Antiparallel Interactions that Mediate Homophilic Specificity.
Nicoludis JM, Lau SY, Schärfe CP, Marks DS, Weihofen WA, Gaudet R.
Nicoludis JM, et al. Among authors: scharfe cp.
Structure. 2015 Nov 3;23(11):2087-98. doi: 10.1016/j.str.2015.09.005. Epub 2015 Oct 15.
Structure. 2015.
PMID: 26481813
Free PMC article.
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