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Page 1
Metagenomic analysis of stressed coral holobionts.
Vega Thurber R, Willner-Hall D, Rodriguez-Mueller B, Desnues C, Edwards RA, Angly F, Dinsdale E, Kelly L, Rohwer F. Vega Thurber R, et al. Among authors: rodriguez mueller b. Environ Microbiol. 2009 Aug;11(8):2148-63. doi: 10.1111/j.1462-2920.2009.01935.x. Epub 2009 Apr 22. Environ Microbiol. 2009. PMID: 19397678
Metabolic reconstruction for metagenomic data and its application to the human microbiome.
Abubucker S, Segata N, Goll J, Schubert AM, Izard J, Cantarel BL, Rodriguez-Mueller B, Zucker J, Thiagarajan M, Henrissat B, White O, Kelley ST, Methé B, Schloss PD, Gevers D, Mitreva M, Huttenhower C. Abubucker S, et al. Among authors: rodriguez mueller b. PLoS Comput Biol. 2012;8(6):e1002358. doi: 10.1371/journal.pcbi.1002358. Epub 2012 Jun 13. PLoS Comput Biol. 2012. PMID: 22719234 Free PMC article.
Metagenomic analysis indicates that stressors induce production of herpes-like viruses in the coral Porites compressa.
Vega Thurber RL, Barott KL, Hall D, Liu H, Rodriguez-Mueller B, Desnues C, Edwards RA, Haynes M, Angly FE, Wegley L, Rohwer FL. Vega Thurber RL, et al. Among authors: rodriguez mueller b. Proc Natl Acad Sci U S A. 2008 Nov 25;105(47):18413-8. doi: 10.1073/pnas.0808985105. Epub 2008 Nov 18. Proc Natl Acad Sci U S A. 2008. PMID: 19017800 Free PMC article.
Metagenomic islands of hyperhalophiles: the case of Salinibacter ruber.
Pasić L, Rodriguez-Mueller B, Martin-Cuadrado AB, Mira A, Rohwer F, Rodriguez-Valera F. Pasić L, et al. Among authors: rodriguez mueller b. BMC Genomics. 2009 Dec 1;10:570. doi: 10.1186/1471-2164-10-570. BMC Genomics. 2009. PMID: 19951421 Free PMC article.
The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes.
Angly FE, Willner D, Prieto-Davó A, Edwards RA, Schmieder R, Vega-Thurber R, Antonopoulos DA, Barott K, Cottrell MT, Desnues C, Dinsdale EA, Furlan M, Haynes M, Henn MR, Hu Y, Kirchman DL, McDole T, McPherson JD, Meyer F, Miller RM, Mundt E, Naviaux RK, Rodriguez-Mueller B, Stevens R, Wegley L, Zhang L, Zhu B, Rohwer F. Angly FE, et al. Among authors: rodriguez mueller b. PLoS Comput Biol. 2009 Dec;5(12):e1000593. doi: 10.1371/journal.pcbi.1000593. Epub 2009 Dec 11. PLoS Comput Biol. 2009. PMID: 20011103 Free PMC article.