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2014 1
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Page 1
TAD evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function.
Okhovat M, VanCampen J, Nevonen KA, Harshman L, Li W, Layman CE, Ward S, Herrera J, Wells J, Sheng RR, Mao Y, Ndjamen B, Lima AC, Vigh-Conrad KA, Stendahl AM, Yang R, Fedorov L, Matthews IR, Easow SA, Chan DK, Jan TA, Eichler EE, Rugonyi S, Conrad DF, Ahituv N, Carbone L. Okhovat M, et al. Among authors: nevonen ka. Nat Commun. 2023 Dec 7;14(1):8111. doi: 10.1038/s41467-023-43841-8. Nat Commun. 2023. PMID: 38062027 Free PMC article.
TAD Evolutionary and functional characterization reveals diversity in mammalian TAD boundary properties and function.
Okhovat M, VanCampen J, Lima AC, Nevonen KA, Layman CE, Ward S, Herrera J, Stendahl AM, Yang R, Harshman L, Li W, Sheng RR, Mao Y, Fedorov L, Ndjamen B, Vigh-Conrad KA, Matthews IR, Easow SA, Chan DK, Jan TA, Eichler EE, Rugonyi S, Conrad DF, Ahituv N, Carbone L. Okhovat M, et al. Among authors: nevonen ka. bioRxiv [Preprint]. 2023 Mar 7:2023.03.07.531534. doi: 10.1101/2023.03.07.531534. bioRxiv. 2023. PMID: 36945527 Free PMC article. Updated. Preprint.
DNA Methylation Analysis of Turner Syndrome BAV.
Gutierrez J, Davis BA, Nevonen KA, Ward S, Carbone L, Maslen CL. Gutierrez J, et al. Among authors: nevonen ka. Front Genet. 2022 May 31;13:872750. doi: 10.3389/fgene.2022.872750. eCollection 2022. Front Genet. 2022. PMID: 35711915 Free PMC article.
Somatic retrotransposition in the developing rhesus macaque brain.
Billon V, Sanchez-Luque FJ, Rasmussen J, Bodea GO, Gerhardt DJ, Gerdes P, Cheetham SW, Schauer SN, Ajjikuttira P, Meyer TJ, Layman CE, Nevonen KA, Jansz N, Garcia-Perez JL, Richardson SR, Ewing AD, Carbone L, Faulkner GJ. Billon V, et al. Among authors: nevonen ka. Genome Res. 2022 Jul;32(7):1298-1314. doi: 10.1101/gr.276451.121. Epub 2022 Jun 21. Genome Res. 2022. PMID: 35728967 Free PMC article.
Co-option of the lineage-specific LAVA retrotransposon in the gibbon genome.
Okhovat M, Nevonen KA, Davis BA, Michener P, Ward S, Milhaven M, Harshman L, Sohota A, Fernandes JD, Salama SR, O'Neill RJ, Ahituv N, Veeramah KR, Carbone L. Okhovat M, et al. Among authors: nevonen ka. Proc Natl Acad Sci U S A. 2020 Aug 11;117(32):19328-19338. doi: 10.1073/pnas.2006038117. Epub 2020 Jul 20. Proc Natl Acad Sci U S A. 2020. PMID: 32690705 Free PMC article.
Grandmaternal allergen sensitization reprograms epigenetic and airway responses to allergen in second-generation offspring.
Lebold KM, Cook M, Pincus AB, Nevonen KA, Davis BA, Carbone L, Calco GN, Pierce AB, Proskocil BJ, Fryer AD, Jacoby DB, Drake MG. Lebold KM, et al. Among authors: nevonen ka. Am J Physiol Lung Cell Mol Physiol. 2023 Dec 1;325(6):L776-L787. doi: 10.1152/ajplung.00103.2023. Epub 2023 Oct 10. Am J Physiol Lung Cell Mol Physiol. 2023. PMID: 37814791 Free article.
Author Correction: Myeloid lineage enhancers drive oncogene synergy in CEBPA/CSF3R mutant acute myeloid leukemia.
Braun TP, Okhovat M, Coblentz C, Carratt SA, Foley A, Schonrock Z, Curtiss BM, Nevonen K, Davis B, Garcia B, LaTocha D, Weeder BR, Grzadkowski MR, Estabrook JC, Manning HG, Watanabe-Smith K, Jeng S, Smith JL, Leonti AR, Ries RE, McWeeney S, Di Genua C, Drissen R, Nerlov C, Meshinchi S, Carbone L, Druker BJ, Maxson JE. Braun TP, et al. Among authors: nevonen k. Nat Commun. 2022 Jun 16;13(1):3471. doi: 10.1038/s41467-022-30987-0. Nat Commun. 2022. PMID: 35710794 Free PMC article. No abstract available.
Myeloid lineage enhancers drive oncogene synergy in CEBPA/CSF3R mutant acute myeloid leukemia.
Braun TP, Okhovat M, Coblentz C, Carratt SA, Foley A, Schonrock Z, Curtiss BM, Nevonen K, Davis B, Garcia B, LaTocha D, Weeder BR, Grzadkowski MR, Estabrook JC, Manning HG, Watanabe-Smith K, Jeng S, Smith JL, Leonti AR, Ries RE, McWeeney S, Di Genua C, Drissen R, Nerlov C, Meshinchi S, Carbone L, Druker BJ, Maxson JE. Braun TP, et al. Among authors: nevonen k. Nat Commun. 2019 Nov 29;10(1):5455. doi: 10.1038/s41467-019-13364-2. Nat Commun. 2019. PMID: 31784538 Free PMC article.
Transcriptomic and epigenomic characterization of the developing bat wing.
Eckalbar WL, Schlebusch SA, Mason MK, Gill Z, Parker AV, Booker BM, Nishizaki S, Muswamba-Nday C, Terhune E, Nevonen KA, Makki N, Friedrich T, VanderMeer JE, Pollard KS, Carbone L, Wall JD, Illing N, Ahituv N. Eckalbar WL, et al. Among authors: nevonen ka. Nat Genet. 2016 May;48(5):528-36. doi: 10.1038/ng.3537. Epub 2016 Mar 28. Nat Genet. 2016. PMID: 27019111 Free PMC article.
21 results