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Page 1
MAVE-NN: learning genotype-phenotype maps from multiplex assays of variant effect.
Genome Biol. 2022 Apr 15;23(1):98. doi: 10.1186/s13059-022-02661-7.
Genome Biol. 2022.
PMID: 35428271
Free PMC article.
Evolution of DNA replication origin specification and gene silencing mechanisms.
Hu Y, Tareen A, Sheu YJ, Ireland WT, Speck C, Li H, Joshua-Tor L, Kinney JB, Stillman B.
Hu Y, et al. Among authors: ireland wt.
Nat Commun. 2020 Oct 14;11(1):5175. doi: 10.1038/s41467-020-18964-x.
Nat Commun. 2020.
PMID: 33056978
Free PMC article.
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Mapping DNA sequence to transcription factor binding energy in vivo.
Barnes SL, Belliveau NM, Ireland WT, Kinney JB, Phillips R.
Barnes SL, et al. Among authors: ireland wt.
PLoS Comput Biol. 2019 Feb 4;15(2):e1006226. doi: 10.1371/journal.pcbi.1006226. eCollection 2019 Feb.
PLoS Comput Biol. 2019.
PMID: 30716072
Free PMC article.
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Deciphering the regulatory genome of Escherichia coli, one hundred promoters at a time.
Ireland WT, Beeler SM, Flores-Bautista E, McCarty NS, Röschinger T, Belliveau NM, Sweredoski MJ, Moradian A, Kinney JB, Phillips R.
Ireland WT, et al.
Elife. 2020 Sep 21;9:e55308. doi: 10.7554/eLife.55308.
Elife. 2020.
PMID: 32955440
Free PMC article.
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Systematic approach for dissecting the molecular mechanisms of transcriptional regulation in bacteria.
Belliveau NM, Barnes SL, Ireland WT, Jones DL, Sweredoski MJ, Moradian A, Hess S, Kinney JB, Phillips R.
Belliveau NM, et al. Among authors: ireland wt.
Proc Natl Acad Sci U S A. 2018 May 22;115(21):E4796-E4805. doi: 10.1073/pnas.1722055115. Epub 2018 May 4.
Proc Natl Acad Sci U S A. 2018.
PMID: 29728462
Free PMC article.
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