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Page 1
Usability of reference-free transcriptome assemblies for detection of differential expression: a case study on Aethionema arabicum dimorphic seeds.
BMC Genomics. 2019 Jan 30;20(1):95. doi: 10.1186/s12864-019-5452-4.
BMC Genomics. 2019.
PMID: 30700268
Free PMC article.
The butterfly plant arms-race escalated by gene and genome duplications.
Edger PP, Heidel-Fischer HM, Bekaert M, Rota J, Glöckner G, Platts AE, Heckel DG, Der JP, Wafula EK, Tang M, Hofberger JA, Smithson A, Hall JC, Blanchette M, Bureau TE, Wright SI, dePamphilis CW, Eric Schranz M, Barker MS, Conant GC, Wahlberg N, Vogel H, Pires JC, Wheat CW.
Edger PP, et al. Among authors: hofberger ja.
Proc Natl Acad Sci U S A. 2015 Jul 7;112(27):8362-6. doi: 10.1073/pnas.1503926112. Epub 2015 Jun 22.
Proc Natl Acad Sci U S A. 2015.
PMID: 26100883
Free PMC article.
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Flower power and the mustard bomb: Comparative analysis of gene and genome duplications in glucosinolate biosynthetic pathway evolution in Cleomaceae and Brassicaceae.
van den Bergh E, Hofberger JA, Schranz ME.
van den Bergh E, et al. Among authors: hofberger ja.
Am J Bot. 2016 Jul;103(7):1212-22. doi: 10.3732/ajb.1500445. Epub 2016 Jun 16.
Am J Bot. 2016.
PMID: 27313198
Free article.
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Whole genome and tandem duplicate retention facilitated glucosinolate pathway diversification in the mustard family.
Hofberger JA, Lyons E, Edger PP, Chris Pires J, Eric Schranz M.
Hofberger JA, et al.
Genome Biol Evol. 2013;5(11):2155-73. doi: 10.1093/gbe/evt162.
Genome Biol Evol. 2013.
PMID: 24171911
Free PMC article.
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Large-Scale Evolutionary Analysis of Genes and Supergene Clusters from Terpenoid Modular Pathways Provides Insights into Metabolic Diversification in Flowering Plants.
Hofberger JA, Ramirez AM, Bergh Ev, Zhu X, Bouwmeester HJ, Schuurink RC, Schranz ME.
Hofberger JA, et al.
PLoS One. 2015 Jun 5;10(6):e0128808. doi: 10.1371/journal.pone.0128808. eCollection 2015.
PLoS One. 2015.
PMID: 26046541
Free PMC article.
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A novel approach for multi-domain and multi-gene family identification provides insights into evolutionary dynamics of disease resistance genes in core eudicot plants.
Hofberger JA, Zhou B, Tang H, Jones JD, Schranz ME.
Hofberger JA, et al.
BMC Genomics. 2014 Nov 8;15(1):966. doi: 10.1186/1471-2164-15-966.
BMC Genomics. 2014.
PMID: 25380807
Free PMC article.
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A complex interplay of tandem- and whole-genome duplication drives expansion of the L-type lectin receptor kinase gene family in the brassicaceae.
Hofberger JA, Nsibo DL, Govers F, Bouwmeester K, Schranz ME.
Hofberger JA, et al.
Genome Biol Evol. 2015 Jan 28;7(3):720-34. doi: 10.1093/gbe/evv020.
Genome Biol Evol. 2015.
PMID: 25635042
Free PMC article.
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