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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2007 1
2008 2
2010 1
2012 2
2017 2
2018 1
2020 3
2021 2
2022 1
2023 2
2024 1

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16 results

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Page 1
A Deep Learning Approach to Antibiotic Discovery.
Stokes JM, Yang K, Swanson K, Jin W, Cubillos-Ruiz A, Donghia NM, MacNair CR, French S, Carfrae LA, Bloom-Ackermann Z, Tran VM, Chiappino-Pepe A, Badran AH, Andrews IW, Chory EJ, Church GM, Brown ED, Jaakkola TS, Barzilay R, Collins JJ. Stokes JM, et al. Among authors: cubillos ruiz a. Cell. 2020 Feb 20;180(4):688-702.e13. doi: 10.1016/j.cell.2020.01.021. Cell. 2020. PMID: 32084340 Free PMC article.
Engineering living therapeutics with synthetic biology.
Cubillos-Ruiz A, Guo T, Sokolovska A, Miller PF, Collins JJ, Lu TK, Lora JM. Cubillos-Ruiz A, et al. Nat Rev Drug Discov. 2021 Dec;20(12):941-960. doi: 10.1038/s41573-021-00285-3. Epub 2021 Oct 6. Nat Rev Drug Discov. 2021. PMID: 34616030 Review.
Discovery of a structural class of antibiotics with explainable deep learning.
Wong F, Zheng EJ, Valeri JA, Donghia NM, Anahtar MN, Omori S, Li A, Cubillos-Ruiz A, Krishnan A, Jin W, Manson AL, Friedrichs J, Helbig R, Hajian B, Fiejtek DK, Wagner FF, Soutter HH, Earl AM, Stokes JM, Renner LD, Collins JJ. Wong F, et al. Among authors: cubillos ruiz a. Nature. 2024 Feb;626(7997):177-185. doi: 10.1038/s41586-023-06887-8. Epub 2023 Dec 20. Nature. 2024. PMID: 38123686
A Deep Learning Approach to Antibiotic Discovery.
Stokes JM, Yang K, Swanson K, Jin W, Cubillos-Ruiz A, Donghia NM, MacNair CR, French S, Carfrae LA, Bloom-Ackermann Z, Tran VM, Chiappino-Pepe A, Badran AH, Andrews IW, Chory EJ, Church GM, Brown ED, Jaakkola TS, Barzilay R, Collins JJ. Stokes JM, et al. Among authors: cubillos ruiz a. Cell. 2020 Apr 16;181(2):475-483. doi: 10.1016/j.cell.2020.04.001. Cell. 2020. PMID: 32302574 Free article. No abstract available.
Toward a genetic system in the marine cyanobacterium Prochlorococcus.
Laurenceau R, Bliem C, Osburne MS, Becker JW, Biller SJ, Cubillos-Ruiz A, Chisholm SW. Laurenceau R, et al. Among authors: cubillos ruiz a. Access Microbiol. 2020 Feb 19;2(4):acmi000107. doi: 10.1099/acmi.0.000107. eCollection 2020. Access Microbiol. 2020. PMID: 33005871 Free PMC article.
Evolutionary radiation of lanthipeptides in marine cyanobacteria.
Cubillos-Ruiz A, Berta-Thompson JW, Becker JW, van der Donk WA, Chisholm SW. Cubillos-Ruiz A, et al. Proc Natl Acad Sci U S A. 2017 Jul 3;114(27):E5424-E5433. doi: 10.1073/pnas.1700990114. Epub 2017 Jun 19. Proc Natl Acad Sci U S A. 2017. PMID: 28630351 Free PMC article.
Draft genomes of three closely related low light-adapted Prochlorococcus.
Berta-Thompson JW, Thomas E, Cubillos-Ruiz A, Hackl T, Becker JW, Coe A, Biller SJ, Berube PM, Chisholm SW. Berta-Thompson JW, et al. Among authors: cubillos ruiz a. BMC Genom Data. 2023 Feb 24;24(1):11. doi: 10.1186/s12863-022-01103-4. BMC Genom Data. 2023. PMID: 36829130 Free PMC article.
Probiotic strains detect and suppress cholera in mice.
Mao N, Cubillos-Ruiz A, Cameron DE, Collins JJ. Mao N, et al. Among authors: cubillos ruiz a. Sci Transl Med. 2018 Jun 13;10(445):eaao2586. doi: 10.1126/scitranslmed.aao2586. Sci Transl Med. 2018. PMID: 29899022 Free PMC article.
16 results