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A transient ischemic environment induces reversible compaction of chromatin.
Kirmes I, Szczurek A, Prakash K, Charapitsa I, Heiser C, Musheev M, Schock F, Fornalczyk K, Ma D, Birk U, Cremer C, Reid G. Kirmes I, et al. Among authors: charapitsa i. Genome Biol. 2015 Nov 5;16:246. doi: 10.1186/s13059-015-0802-2. Genome Biol. 2015. PMID: 26541514 Free PMC article.
The nonspecific lethal complex is a transcriptional regulator in Drosophila.
Raja SJ, Charapitsa I, Conrad T, Vaquerizas JM, Gebhardt P, Holz H, Kadlec J, Fraterman S, Luscombe NM, Akhtar A. Raja SJ, et al. Among authors: charapitsa i. Mol Cell. 2010 Jun 25;38(6):827-41. doi: 10.1016/j.molcel.2010.05.021. Mol Cell. 2010. PMID: 20620954 Free article.
Genome-wide modeling of transcription kinetics reveals patterns of RNA production delays.
Honkela A, Peltonen J, Topa H, Charapitsa I, Matarese F, Grote K, Stunnenberg HG, Reid G, Lawrence ND, Rattray M. Honkela A, et al. Among authors: charapitsa i. Proc Natl Acad Sci U S A. 2015 Oct 20;112(42):13115-20. doi: 10.1073/pnas.1420404112. Epub 2015 Oct 5. Proc Natl Acad Sci U S A. 2015. PMID: 26438844 Free PMC article.
Replicative senescence is associated with nuclear reorganization and with DNA methylation at specific transcription factor binding sites.
Hänzelmann S, Beier F, Gusmao EG, Koch CM, Hummel S, Charapitsa I, Joussen S, Benes V, Brümmendorf TH, Reid G, Costa IG, Wagner W. Hänzelmann S, et al. Among authors: charapitsa i. Clin Epigenetics. 2015 Mar 4;7(1):19. doi: 10.1186/s13148-015-0057-5. eCollection 2015. Clin Epigenetics. 2015. PMID: 25763115 Free PMC article.