Catoiu E[au] - Search Results

Year	Number of Results
2018	5
2019	1
2020	2
2023	2
2024	0

1

Establishing comprehensive quaternary structural proteomes from genome sequence.

Catoiu EA, Mih N, Lu M, Palsson B. Catoiu EA, et al. Res Sq [Preprint]. 2023 May 19:rs.3.rs-2923626. doi: 10.21203/rs.3.rs-2923626/v1. Res Sq. 2023. PMID: 37292890 Free PMC article. Preprint.

2

Whole-genome sequences from wild-type and laboratory-evolved strains define the alleleome and establish its hallmarks.

Catoiu EA, Phaneuf P, Monk J, Palsson BO. Catoiu EA, et al. Proc Natl Acad Sci U S A. 2023 Apr 11;120(15):e2218835120. doi: 10.1073/pnas.2218835120. Epub 2023 Apr 3. Proc Natl Acad Sci U S A. 2023. PMID: 37011218 Free PMC article.

3

Pseudogene repair driven by selection pressure applied in experimental evolution.

Anand A, Olson CA, Yang L, Sastry AV, Catoiu E, Choudhary KS, Phaneuf PV, Sandberg TE, Xu S, Hefner Y, Szubin R, Feist AM, Palsson BO. Anand A, et al. Among authors: catoiu e. Nat Microbiol. 2019 Mar;4(3):386-389. doi: 10.1038/s41564-018-0340-2. Epub 2019 Jan 28. Nat Microbiol. 2019. PMID: 30692668

4

ssbio: a Python framework for structural systems biology.

Mih N, Brunk E, Chen K, Catoiu E, Sastry A, Kavvas E, Monk JM, Zhang Z, Palsson BO. Mih N, et al. Among authors: catoiu e. Bioinformatics. 2018 Jun 15;34(12):2155-2157. doi: 10.1093/bioinformatics/bty077. Bioinformatics. 2018. PMID: 29444205 Free PMC article.

5

Genome-scale metabolic reconstructions of multiple Salmonella strains reveal serovar-specific metabolic traits.

Seif Y, Kavvas E, Lachance JC, Yurkovich JT, Nuccio SP, Fang X, Catoiu E, Raffatellu M, Palsson BO, Monk JM. Seif Y, et al. Among authors: catoiu e. Nat Commun. 2018 Sep 14;9(1):3771. doi: 10.1038/s41467-018-06112-5. Nat Commun. 2018. PMID: 30218022 Free PMC article.

6

Reframing gene essentiality in terms of adaptive flexibility.

Guzmán GI, Olson CA, Hefner Y, Phaneuf PV, Catoiu E, Crepaldi LB, Micas LG, Palsson BO, Feist AM. Guzmán GI, et al. Among authors: catoiu e. BMC Syst Biol. 2018 Dec 17;12(1):143. doi: 10.1186/s12918-018-0653-z. BMC Syst Biol. 2018. PMID: 30558585 Free PMC article.

7

Machine learning and structural analysis of Mycobacterium tuberculosis pan-genome identifies genetic signatures of antibiotic resistance.

Kavvas ES, Catoiu E, Mih N, Yurkovich JT, Seif Y, Dillon N, Heckmann D, Anand A, Yang L, Nizet V, Monk JM, Palsson BO. Kavvas ES, et al. Among authors: catoiu e. Nat Commun. 2018 Oct 17;9(1):4306. doi: 10.1038/s41467-018-06634-y. Nat Commun. 2018. PMID: 30333483 Free PMC article.

8

OxyR Is a Convergent Target for Mutations Acquired during Adaptation to Oxidative Stress-Prone Metabolic States.

Anand A, Chen K, Catoiu E, Sastry AV, Olson CA, Sandberg TE, Seif Y, Xu S, Szubin R, Yang L, Feist AM, Palsson BO. Anand A, et al. Among authors: catoiu e. Mol Biol Evol. 2020 Mar 1;37(3):660-667. doi: 10.1093/molbev/msz251. Mol Biol Evol. 2020. PMID: 31651953 Free PMC article.

9

Adaptations of Escherichia coli strains to oxidative stress are reflected in properties of their structural proteomes.

Mih N, Monk JM, Fang X, Catoiu E, Heckmann D, Yang L, Palsson BO. Mih N, et al. Among authors: catoiu e. BMC Bioinformatics. 2020 Apr 29;21(1):162. doi: 10.1186/s12859-020-3505-y. BMC Bioinformatics. 2020. PMID: 32349661 Free PMC article.

10

COBRAme: A computational framework for genome-scale models of metabolism and gene expression.

Lloyd CJ, Ebrahim A, Yang L, King ZA, Catoiu E, O'Brien EJ, Liu JK, Palsson BO. Lloyd CJ, et al. Among authors: catoiu e. PLoS Comput Biol. 2018 Jul 5;14(7):e1006302. doi: 10.1371/journal.pcbi.1006302. eCollection 2018 Jul. PLoS Comput Biol. 2018. PMID: 29975681 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Results by year

Text availability

Article attribute

Article type

Publication date

10 results

Results by year

Search Page

Filters

My NCBI Filters

Results by year

Text availability

Article attribute

Article type

Publication date

Search Results

10 results

Results by year