PT  - JOURNAL ARTICLE
AU  - Ka-Kit Lam
AU  - Kurt LaButti
AU  - Asif Khalak
AU  - David Tse
TI  - FinisherSC : A repeat-aware tool for upgrading de-novo assembly using long reads
AID  - 10.1101/010215
DP  - 2015 Jan 01
TA  - bioRxiv
PG  - 010215
4099  - http://biorxiv.org/content/early/2015/04/04/010215.short
4100  - http://biorxiv.org/content/early/2015/04/04/010215.full
AB  - We introduce FinisherSC, a repeat-aware and scalable tool for upgrading de-novo assembly using long reads. Experiments with real data suggest that FinisherSC can provide longer and higher quality contigs than existing tools while maintaining high concordance.Availability The tool and data are available and will be maintained at http://kakitone.github.io/finishingTool/Contact dntse{at}stanford.edu