PT - JOURNAL ARTICLE AU - Wei Lin AU - Soma Mandal AU - David Degen AU - Yu Liu AU - Yon W. Ebright AU - Shengjian Li AU - Yu Feng AU - Yu Zhang AU - Sukhendu Mandal AU - Yi Jiang AU - Shuang Liu AU - Matthew Gigliotti AU - Meliza Talaue AU - Nancy Connell AU - Kalyan Das AU - Eddy Arnold AU - Richard H. Ebright TI - Structural basis of <em>Mycobacterium tuberculosis</em> transcription and transcription inhibition AID - 10.1101/099606 DP - 2017 Jan 01 TA - bioRxiv PG - 099606 4099 - http://biorxiv.org/content/early/2017/01/10/099606.short 4100 - http://biorxiv.org/content/early/2017/01/10/099606.full AB - One Sentence Summary Structures of Mycobacterium tuberculosis RNA polymerase reveal taxon-specific properties and binding sites of known and new antituberculosis agentsAbstract Mycobacterium tuberculosis (Mtb) is the causative agent of tuberculosis, which kills 1.8 million annually. Mtb RNA polymerase (RNAP) is the target of the first-line antituberculosis drug rifampin (Rif). We report crystal structures of Mtb RNAP, alone and in complex with Rif. The results identify an Mtb-specific structural module of Mtb RNAP and establish that Rif functions by a steric-occlusion mechanism that prevents extension of RNA. We also report novel non-Rif-related compounds–Nα-aroyl-N-aryl-phenylalaninamides (AAPs)–that potently and selectively inhibit Mtb RNAP and Mtb growth, and we report crystal structures of Mtb RNAP in complex with AAPs. AAPs bind to a different site on Mtb RNAP than Rif, exhibit no cross-resistance with Rif, function additively when co-administered with Rif, and suppress resistance emergence when co-administered with Rif.