PT - JOURNAL ARTICLE AU - W. B. Langdon TI - Benchmarking BarraCUDA on Epigenetic DNA and nVidia Pascal GPUs AID - 10.1101/095075 DP - 2016 Jan 01 TA - bioRxiv PG - 095075 4099 - http://biorxiv.org/content/early/2016/12/17/095075.short 4100 - http://biorxiv.org/content/early/2016/12/17/095075.full AB - Typically BarraCUDA uses CUDA graphics cards to map DNA reads to the human genome. Previously its software source code was genetically miproved for short paired end next generation sequences. On longer, 150 base paired end noisy Cambridge Epigsnetix’s data, a Pascal GTX 1080 proc esses about 10000 strings per second, comparable with twin nVidia Tesla K40.