PT  - JOURNAL ARTICLE
AU  - Nikolas Pontikos
AU  - Jing Yu
AU  - Fiona Blanco-Kelly
AU  - Tom Vulliamy
AU  - Tsz Lun Wong
AU  - Cian Murphy
AU  - Valentina Cipriani
AU  - Alessia Fiorentino
AU  - Gavin Arno
AU  - Daniel Greene
AU  - Julius OB Jacobsen
AU  - Tristan Clark
AU  - David S Gregory
AU  - Andrea Nemeth
AU  - Stephanie Halford
AU  - Susan Downes
AU  - Graeme C Black
AU  - Andrew R Webster
AU  - Alison Hardcastle
AU  - Vincent Plagnol
TI  - Phenopolis: an open platform for harmonization and analysis of sequencing and phenotype data
AID  - 10.1101/084582
DP  - 2016 Jan 01
TA  - bioRxiv
PG  - 084582
4099  - http://biorxiv.org/content/early/2016/10/31/084582.short
4100  - http://biorxiv.org/content/early/2016/10/31/084582.full
AB  - Summary Phenopolis is an open-source web server which provides an intuitive interface to genetic and phenotypic databases. It integrates analysis tools which include variant filtering and gene prioritisation based on phenotype. The Phenopolis platform will accelerate clinical diagnosis, gene discovery and encourage wider adoption of the Human Phenotype Ontology in the study of rare disease.Availability and Implementation A demo of the website is available at http://phenopolis.github.io (username: demo, password: demo123). If you wish to install a local copy, souce code and installation instruction are available at https://github.com/pontikos/phenopolis. The software is implemented using Python, MongoDB, HTML/Javascript and various bash shell scripts.Contact n.pontikos{at}ucl.ac.ukSupplementary information http://phenopolis.github.io