%0 Journal Article %A Christoph N. Schlaffner %A Georg Pirklbauer %A Andreas Bender %A Jyoti S. Choudhary %T PoGo: Jumping from Peptides to Genomic Loci %D 2016 %R 10.1101/079772 %J bioRxiv %P 079772 %X Current tools for visualization and integration of proteomics with other omics datasets are inadequate for large-scale studies and capture only basic sequence identity information. We developed PoGo for mapping peptides identified through mass spectrometry to a reference genome to overcome these limitations. PoGo exhibited superior performance over other tools on benchmarking with large-scale human tissue and cancer phosphoproteome datasets. Additionally, extended functionality enables representation of single nucleotide variants, post-translational modifications and quantitative features. %U https://www.biorxiv.org/content/biorxiv/early/2016/10/07/079772.full.pdf