RT Journal Article SR Electronic T1 Omics Pipe: A Computational Framework for Reproducible Multi-Omics Data Analysis JF bioRxiv FD Cold Spring Harbor Laboratory SP 008383 DO 10.1101/008383 A1 Kathleen M. Fisch A1 Tobias Meissner A1 Louis Gioia A1 Jean-Christophe Ducom A1 Tristan M. Carland A1 Salvatore Loguercio A1 Andrew I. Su YR 2014 UL http://biorxiv.org/content/early/2014/08/23/008383.abstract AB Omics Pipe (https://bitbucket.org/sulab/omics_pipe) is a computational platform that automates multi-omics data analysis pipelines on high performance compute clusters and in the cloud. It supports best practice published pipelines for RNA-seq, miRNA-seq, Exome-seq, Whole Genome sequencing, ChIP-seq analyses and automatic processing of data from The Cancer Genome Atlas. Omics Pipe provides researchers with a tool for reproducible, open source and extensible next generation sequencing analysis.