RT Journal Article
SR Electronic
T1 IMAN: Interlog protein network reconstruction, Matching and ANalysis
JF bioRxiv
FD Cold Spring Harbor Laboratory
SP 069104
DO 10.1101/069104
A1 Mohieddin Jafari
A1 Payman Nickchi
A1 Abdollah Safari
A1 Soheil Jahangiri Tazehkand
A1 Mehdi Mirzaie
YR 2016
UL http://biorxiv.org/content/early/2016/08/11/069104.abstract
AB IMAN is an open-source R package that offers users to reconstruct Interlog Protein Network (IPN) integrated from several Protein-protein Interaction Networks (PPIN). Users can overlay different PPINs to mine conserved common network between diverse species. Currently STRING database is applied to extract PPINs with all experimental and computational interaction prediction methods. IMAN helps to retrieve IPN with different degrees of conservation to employ for better protein function prediction and PPIN analysis.Availability IMAN package does not require any registration and is freely available at http://bs.ipm.ac.ir/softwares/IMAN or http://jafarilab-pasteur.com/content/software/IMAN.html.Contact mjafari{at}ipm.irSupplementary information Supplementary data are available at Bioinformatics online.