RT Journal Article
SR Electronic
T1 DNA methylation plays a role on in vitro culture induced loss of virulence in Botrytis cinerea
JF bioRxiv
FD Cold Spring Harbor Laboratory
SP 059477
DO 10.1101/059477
A1 James Breen
A1 Luis Alejandro Jose Mur
A1 Anushen Sivakumaran
A1 Aderemi Akinyemi
A1 Michael James Wilkinson
A1 Carlos Marcelino Rodriguez Lopez
YR 2016
UL http://biorxiv.org/content/early/2016/08/04/059477.abstract
AB Pathogenic fungi can lose virulence after protracted periods of culture but little is known of the mechanisms regulating this. Here we assess whether DNA methylation could play a role in this phenomenon by the methylome analysis of virulent and reduced virulence derivative cultures of Botrytis cinerea, and identify the genes/genomic regions affected by these epigenetic modifications. Virulence declined during the eight months culture and recovered after one fungal generation on A. thaliana. Methylation-sensitive amplified polymorphisms show that epi/genetic variation followed virulence changes during culture. Whole genome sequencing showed no significant genetic changes during culture. Conversely, bisulfite sequencing showed significant changes both on global and local methylation patterns. We suggest that virulence is a non-essential plastic character regulated by DNA methylation during protracted in vitro culture. We propose DNA methylation as a regulator of the high virulence/low virulence transition in B. cinerea and as a potential mechanism to control pathogenicity.