%0 Journal Article %A SW Davies %A D Wham %A MR Kanke %A MV Matz %T Ecological factors rather than barriers to dispersal shape genetic structure of algal symbionts in horizontally-transmitting corals %D 2016 %R 10.1101/037994 %J bioRxiv %P 037994 %X Many reef-building corals acquire their algal symbionts (Symbiodinium sp.) from the local environment upon recruitment. This horizontal transmission strategy where hosts pair with locally available symbionts could serve to increase coral fitness across diverse environments, as long as the host maintains high promiscuity and symbionts adapt locally. Here, we tested this hypothesis in two coral host species by comparing host and symbiont genetic structures across different spatial scales in Micronesia. Each host species associated with two genetically distinct Symbiodinium lineages, confirming high promiscuity in broadly dispersing hosts. However, contrary to our initial expectation, symbiont genetic structure was independent of physical barriers to dispersal between islands, unlike genetic structure of their hosts that was nearly perfectly explained by oceanic currents. Instead, Symbiodinium consistently demonstrated genetic divergence among local reefs and between the two host species at each island, although not necessarily between distant islands. These observations indicate that Symbiodinium disperse much more broadly than previously thought and continuously adapt to specific hosts and reef environments across their range, following the classical Baas Becking’s hypothesis: “Everything is everywhere, but the environment selects”. Overall, our findings confirm horizontal transmission could be a mechanism for broadly dispersing coral species to enhance their local fitness by associating with locally adapted symbionts. Dramatic differences in factors driving the genetic structures of horizontally-transmitting corals and their Symbiodinium imply that viewing their combined genomes as a single evolving entity (‘hologenome’) would be misleading. %U https://www.biorxiv.org/content/biorxiv/early/2016/02/24/037994.1.full.pdf