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Nanopore sequencing and assembly of a human genome with ultra-long reads
Miten Jain, S Koren, J Quick, AC Rand, TA Sasani, JR Tyson, AD Beggs, AT Dilthey, IT Fiddes, S Malla, H Marriott, KH Miga, T Nieto, J O’Grady, HE Olsen, BS Pedersen, A Rhie, H Richardson, AR Quinlan, TP Snutch, L Tee, B Paten, AM Phillippy, JT Simpson, NJ Loman, View ORCID ProfileM Loose
doi: https://doi.org/10.1101/128835
Miten Jain
1UC Santa Cruz Genomics Institute, University of California, Santa Cruz, CA, USA
S Koren
2Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, Maryland, USA
J Quick
3Institute of Microbiology and Infection, University of Birmingham, Birmingham B15 2TT, UK
AC Rand
1UC Santa Cruz Genomics Institute, University of California, Santa Cruz, CA, USA
TA Sasani
4Department of Human Genetics, University of Utah, Salt Lake City, UT, USA
5USTAR Center for Genetic Discovery, University of Utah, Salt Lake City, UT, USA
JR Tyson
7Michael Smith Laboratories and Djavad Mowafaghian Centre for Brain Health, University of British Columbia, Vancouver, Canada
AD Beggs
8Surgical Research Laboratory, Institute of Cancer & Genomic Science, University of Birmingham, UK
AT Dilthey
2Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, Maryland, USA
IT Fiddes
1UC Santa Cruz Genomics Institute, University of California, Santa Cruz, CA, USA
S Malla
9DeepSeq, School of Life Sciences, University of Nottingham, UK
H Marriott
9DeepSeq, School of Life Sciences, University of Nottingham, UK
KH Miga
1UC Santa Cruz Genomics Institute, University of California, Santa Cruz, CA, USA
T Nieto
8Surgical Research Laboratory, Institute of Cancer & Genomic Science, University of Birmingham, UK
J O’Grady
10Norwich Medical School, University of East Anglia, Norwich, UK
HE Olsen
1UC Santa Cruz Genomics Institute, University of California, Santa Cruz, CA, USA
BS Pedersen
4Department of Human Genetics, University of Utah, Salt Lake City, UT, USA
5USTAR Center for Genetic Discovery, University of Utah, Salt Lake City, UT, USA
A Rhie
2Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, Maryland, USA
H Richardson
10Norwich Medical School, University of East Anglia, Norwich, UK
AR Quinlan
4Department of Human Genetics, University of Utah, Salt Lake City, UT, USA
5USTAR Center for Genetic Discovery, University of Utah, Salt Lake City, UT, USA
6Department of Biomedical Informatics, University of Utah, Salt Lake City, UT, USA
TP Snutch
7Michael Smith Laboratories and Djavad Mowafaghian Centre for Brain Health, University of British Columbia, Vancouver, Canada
L Tee
8Surgical Research Laboratory, Institute of Cancer & Genomic Science, University of Birmingham, UK
B Paten
1UC Santa Cruz Genomics Institute, University of California, Santa Cruz, CA, USA
AM Phillippy
2Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, Maryland, USA
JT Simpson
11Ontario Institute for Cancer Research, Toronto M5G 0A3, Canada
12Department of Computer Science, University of Toronto, Toronto M5S 3G4, Canada
NJ Loman
3Institute of Microbiology and Infection, University of Birmingham, Birmingham B15 2TT, UK
M Loose
9DeepSeq, School of Life Sciences, University of Nottingham, UK
Article usage
Posted April 20, 2017.
Nanopore sequencing and assembly of a human genome with ultra-long reads
Miten Jain, S Koren, J Quick, AC Rand, TA Sasani, JR Tyson, AD Beggs, AT Dilthey, IT Fiddes, S Malla, H Marriott, KH Miga, T Nieto, J O’Grady, HE Olsen, BS Pedersen, A Rhie, H Richardson, AR Quinlan, TP Snutch, L Tee, B Paten, AM Phillippy, JT Simpson, NJ Loman, M Loose
bioRxiv 128835; doi: https://doi.org/10.1101/128835
Nanopore sequencing and assembly of a human genome with ultra-long reads
Miten Jain, S Koren, J Quick, AC Rand, TA Sasani, JR Tyson, AD Beggs, AT Dilthey, IT Fiddes, S Malla, H Marriott, KH Miga, T Nieto, J O’Grady, HE Olsen, BS Pedersen, A Rhie, H Richardson, AR Quinlan, TP Snutch, L Tee, B Paten, AM Phillippy, JT Simpson, NJ Loman, M Loose
bioRxiv 128835; doi: https://doi.org/10.1101/128835
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