Abstract
Motivation Advances in the experimental state of the art have provided us and continue to provide us with more and more detailed information regarding the mechanisms underlying signal transduction phenomena in living cells. Simultaneously, progress in modelling techniques and computer hardware enable simulations of ever larger models. We present rxncon, a modelling language composed of precise and concise statements describing the experimental knowledge of signalling network.
Results We provide the syntax and semantics of rxncon, the reaction-contingency language.
Availability http://github.com/rxncon
Contact jesper.romers{at}hu-berlin.de
Contact marcus.krantz{at}biologie.hu-berlin.de
Supplementary information n/a online.
Copyright
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