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Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis
Marcin J. Skwark, Nicholas J Croucher, Santeri Puranen, Claire Chewapreecha, Maiju Pesonen, Ying ying Xu, Paul Turner, Simon R. Harris, Julian Parkhill, Stephen D. Bentley, Erik Aurell, Jukka Corander
doi: https://doi.org/10.1101/071696
Marcin J. Skwark
1Department of Chemistry, Vanderbilt University, Nashville, TN 37235, USA
Nicholas J Croucher
2Department of Infectious Disease Epidemiology, Imperial College, London SW7 2AZ, UK
Santeri Puranen
3Department of Computer Science, Aalto University, 00076 Espoo, Finland
Claire Chewapreecha
4Department of Medicine, University of Cambridge, Cambridge CB2 0SP, UK
Maiju Pesonen
3Department of Computer Science, Aalto University, 00076 Espoo, Finland
Ying ying Xu
3Department of Computer Science, Aalto University, 00076 Espoo, Finland
Paul Turner
5Shoklo Malaria Research Unit, Mahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Mae Sot 10400, Thailand
6Centre for Tropical Medicine, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7BN, UK
Simon R. Harris
7Pathogen Genomics, Wellcome Trust Sanger Institute, Cambridge CB10 1SA, UK
Julian Parkhill
7Pathogen Genomics, Wellcome Trust Sanger Institute, Cambridge CB10 1SA, UK
Stephen D. Bentley
7Pathogen Genomics, Wellcome Trust Sanger Institute, Cambridge CB10 1SA, UK
Erik Aurell
3Department of Computer Science, Aalto University, 00076 Espoo, Finland
8Department of Computational Biology, KTH, 100 44 Stockholm, Sweden
Jukka Corander
7Pathogen Genomics, Wellcome Trust Sanger Institute, Cambridge CB10 1SA, UK
9Department of Mathematics and Statistics, University of Helsinki, 00014 Helsinki, Finland
10Department of Biostatistics, University of Oslo, 0317 Oslo, Norway
11Department of Veterinary Medicine, University of Cambridge, Cambridge CB3 0ES, UK
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Posted August 25, 2016.
Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis
Marcin J. Skwark, Nicholas J Croucher, Santeri Puranen, Claire Chewapreecha, Maiju Pesonen, Ying ying Xu, Paul Turner, Simon R. Harris, Julian Parkhill, Stephen D. Bentley, Erik Aurell, Jukka Corander
bioRxiv 071696; doi: https://doi.org/10.1101/071696
Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis
Marcin J. Skwark, Nicholas J Croucher, Santeri Puranen, Claire Chewapreecha, Maiju Pesonen, Ying ying Xu, Paul Turner, Simon R. Harris, Julian Parkhill, Stephen D. Bentley, Erik Aurell, Jukka Corander
bioRxiv 071696; doi: https://doi.org/10.1101/071696
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