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Detecting Genome-wide Variants of Eurasian Facial Shape Differentiation: DNA based Face Prediction Tested in Forensic Scenario

Lu Qiao, Yajun Yang, Pengcheng Fu, Sile Hu, Hang Zhou, Jingze Tan, Yan Lu, Haiyi Lou, Dongsheng Lu, Sijie Wu, Jing Guo, Shouneng Peng, Li Jin, Yaqun Guan, Sijia Wang, Shuhua Xu, Kun Tang
doi: http://dx.doi.org/10.1101/062950
Lu Qiao
Chinese Academy of Sciences (CAS) Laboratory of Computational Biology;
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Yajun Yang
Fudan University;
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Pengcheng Fu
the First People's Hospital of Chenzhou;
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Sile Hu
CAS-MPG Partner Institute for Computational Biology;
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Hang Zhou
Chinese Academy of Sciences (CAS) Laboratory of Computational Biology;
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Jingze Tan
Fudan University;
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Yan Lu
Chinese Academy of Sciences (CAS) Laboratory of Computational Biology;
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Haiyi Lou
Chinese Academy of Sciences (CAS) Laboratory of Computational Biology;
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Dongsheng Lu
Chinese Academy of Sciences (CAS) Laboratory of Computational Biology;
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Sijie Wu
Chinese Academy of Sciences (CAS) Laboratory of Computational Biology;
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Jing Guo
Chinese Academy of Sciences (CAS) Laboratory of Computational Biology;
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Shouneng Peng
Chinese Academy of Sciences (CAS) Laboratory of Computational Biology;
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Li Jin
Fudan University;
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Yaqun Guan
Xinjiang Medical University
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Sijia Wang
Chinese Academy of Sciences (CAS) Laboratory of Computational Biology;
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Shuhua Xu
Chinese Academy of Sciences (CAS) Laboratory of Computational Biology;
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Kun Tang
Chinese Academy of Sciences (CAS) Laboratory of Computational Biology;
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Abstract

It is a long standing question as to which genes define the characteristic facial features among different ethnic groups. In this study, we use Uyghurs, an ancient admixed population to query the genetic bases why Europeans and Han Chinese look different. Facial traits were analyzed based on high-dense 3D facial images; numerous biometric spaces were examined for divergent facial features between European and Han Chinese, ranging from inter-landmark distances to dense shape geometrics. Genome-wide association analyses were conducted on a discovery panel of Uyghurs. Six significant loci were identified four of which, rs1868752, rs118078182, rs60159418 at or near UBASH3B, COL23A1, PCDH7 and rs17868256 were replicated in independent cohorts of Uyghurs or Southern Han Chinese. A quantitative model was developed to predict 3D faces based on 277 top GWAS SNPs. In hypothetic forensic scenarios, this model was found to significantly enhance the verification rate, suggesting a practical potential of related research.

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The copyright holder for this preprint is the author/funder. It is made available under a CC-BY-NC-ND 4.0 International license.
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  • Posted July 25, 2016.

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Detecting Genome-wide Variants of Eurasian Facial Shape Differentiation: DNA based Face Prediction Tested in Forensic Scenario
Lu Qiao, Yajun Yang, Pengcheng Fu, Sile Hu, Hang Zhou, Jingze Tan, Yan Lu, Haiyi Lou, Dongsheng Lu, Sijie Wu, Jing Guo, Shouneng Peng, Li Jin, Yaqun Guan, Sijia Wang, Shuhua Xu, Kun Tang
bioRxiv 062950; doi: http://dx.doi.org/10.1101/062950
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Detecting Genome-wide Variants of Eurasian Facial Shape Differentiation: DNA based Face Prediction Tested in Forensic Scenario
Lu Qiao, Yajun Yang, Pengcheng Fu, Sile Hu, Hang Zhou, Jingze Tan, Yan Lu, Haiyi Lou, Dongsheng Lu, Sijie Wu, Jing Guo, Shouneng Peng, Li Jin, Yaqun Guan, Sijia Wang, Shuhua Xu, Kun Tang
bioRxiv 062950; doi: http://dx.doi.org/10.1101/062950

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