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Using reference-free compressed data structures to analyse sequencing reads from thousands of human genomes
Dirk D. Dolle, Zhicheng Liu, Matthew Cotten, Jared T. Simpson, Zamin Iqbal, Richard Durbin, Shane A. McCarthy, Thomas M. Keane
doi: https://doi.org/10.1101/060186
Dirk D. Dolle
1Wellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK
Zhicheng Liu
1Wellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK
2European Bioinformatics Institute, Hinxton, Cambridge CB10 1SD, UK
Matthew Cotten
1Wellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK
Jared T. Simpson
3Ontario Institute for Cancer Research, Toronto, Ontario, M5G 0A3, Canada
4Department of Computer Science, University of Toronto, M5S 3G4,Canada
Zamin Iqbal
5Wellcome Trust Centre for Human Genetics, Oxford OX3 7BN,UK
Richard Durbin
1Wellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK
Shane A. McCarthy
1Wellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK
Thomas M. Keane
1Wellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK
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Posted June 22, 2016.
Using reference-free compressed data structures to analyse sequencing reads from thousands of human genomes
Dirk D. Dolle, Zhicheng Liu, Matthew Cotten, Jared T. Simpson, Zamin Iqbal, Richard Durbin, Shane A. McCarthy, Thomas M. Keane
bioRxiv 060186; doi: https://doi.org/10.1101/060186
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