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Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis
Alexander L. Greninger, Samia N. Naccache, Scot Federman, Guixia Yu, Placide Mbala, Vanessa Bres, Doug Stryke, Jerome Bouquet, Sneha Somasekar, Jeffrey M. Linnen, Roger Dodd, Prime Mulembakani, Bradley S. Schneider, Jean-Jacques Muyembe, Susan L. Stramer, Charles Y. Chiu
doi: https://doi.org/10.1101/020420
Alexander L. Greninger
1Department of Laboratory Medicine, University of California, San Francisco, CA, USA 94107
2UCSF-Abbott Viral Diagnostics and Discovery Center, San Francisco, CA, USA, 91407
Samia N. Naccache
1Department of Laboratory Medicine, University of California, San Francisco, CA, USA 94107
2UCSF-Abbott Viral Diagnostics and Discovery Center, San Francisco, CA, USA, 91407
Scot Federman
1Department of Laboratory Medicine, University of California, San Francisco, CA, USA 94107
2UCSF-Abbott Viral Diagnostics and Discovery Center, San Francisco, CA, USA, 91407
Guixia Yu
1Department of Laboratory Medicine, University of California, San Francisco, CA, USA 94107
2UCSF-Abbott Viral Diagnostics and Discovery Center, San Francisco, CA, USA, 91407
Placide Mbala
3Institut National de Recherche Biomédicale, Democratic Republic of the Congo, Kinshasa, Africa
6Metabiota, Inc., San Francisco, CA 94104
Vanessa Bres
4Hologic, Inc., Bedford, MA 01730
Doug Stryke
1Department of Laboratory Medicine, University of California, San Francisco, CA, USA 94107
2UCSF-Abbott Viral Diagnostics and Discovery Center, San Francisco, CA, USA, 91407
Jerome Bouquet
1Department of Laboratory Medicine, University of California, San Francisco, CA, USA 94107
2UCSF-Abbott Viral Diagnostics and Discovery Center, San Francisco, CA, USA, 91407
Sneha Somasekar
1Department of Laboratory Medicine, University of California, San Francisco, CA, USA 94107
2UCSF-Abbott Viral Diagnostics and Discovery Center, San Francisco, CA, USA, 91407
Jeffrey M. Linnen
4Hologic, Inc., Bedford, MA 01730
Roger Dodd
5American Red Cross, Gaithersburg, MD 2087
Prime Mulembakani
6Metabiota, Inc., San Francisco, CA 94104
Bradley S. Schneider
6Metabiota, Inc., San Francisco, CA 94104
Jean-Jacques Muyembe
3Institut National de Recherche Biomédicale, Democratic Republic of the Congo, Kinshasa, Africa
Susan L. Stramer
5American Red Cross, Gaithersburg, MD 2087
Charles Y. Chiu
1Department of Laboratory Medicine, University of California, San Francisco, CA, USA 94107
2UCSF-Abbott Viral Diagnostics and Discovery Center, San Francisco, CA, USA, 91407
Article usage
Posted June 03, 2015.
Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis
Alexander L. Greninger, Samia N. Naccache, Scot Federman, Guixia Yu, Placide Mbala, Vanessa Bres, Doug Stryke, Jerome Bouquet, Sneha Somasekar, Jeffrey M. Linnen, Roger Dodd, Prime Mulembakani, Bradley S. Schneider, Jean-Jacques Muyembe, Susan L. Stramer, Charles Y. Chiu
bioRxiv 020420; doi: https://doi.org/10.1101/020420
Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis
Alexander L. Greninger, Samia N. Naccache, Scot Federman, Guixia Yu, Placide Mbala, Vanessa Bres, Doug Stryke, Jerome Bouquet, Sneha Somasekar, Jeffrey M. Linnen, Roger Dodd, Prime Mulembakani, Bradley S. Schneider, Jean-Jacques Muyembe, Susan L. Stramer, Charles Y. Chiu
bioRxiv 020420; doi: https://doi.org/10.1101/020420
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