New Results
HISAT: Hierarchical Indexing for Spliced Alignment of Transcripts
View ORCID ProfileDaehwan Kim, View ORCID ProfileBen Langmead, View ORCID ProfileSteven L. Salzberg
doi: https://doi.org/10.1101/012591
Daehwan Kim
1 Center for Computational Biology, McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, 733 N. Broadway, Baltimore, MD, 21205, USA
2 Department of Biostatistics, Bloomberg School of Public Health, Johns Hopkins University, 615 N. Wolfe Street, Baltimore, MD, 21205, USA
Ben Langmead
1 Center for Computational Biology, McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, 733 N. Broadway, Baltimore, MD, 21205, USA
2 Department of Biostatistics, Bloomberg School of Public Health, Johns Hopkins University, 615 N. Wolfe Street, Baltimore, MD, 21205, USA
3 Department of Computer Science, Johns Hopkins University, 3400 North Charles Street, Baltimore, MD, 21218, USA
Steven L. Salzberg
1 Center for Computational Biology, McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, 733 N. Broadway, Baltimore, MD, 21205, USA
2 Department of Biostatistics, Bloomberg School of Public Health, Johns Hopkins University, 615 N. Wolfe Street, Baltimore, MD, 21205, USA
3 Department of Computer Science, Johns Hopkins University, 3400 North Charles Street, Baltimore, MD, 21218, USA
Article usage
Posted December 15, 2014.
HISAT: Hierarchical Indexing for Spliced Alignment of Transcripts
Daehwan Kim, Ben Langmead, Steven L. Salzberg
bioRxiv 012591; doi: https://doi.org/10.1101/012591
Subject Area
Subject Areas
- Biochemistry (11715)
- Bioengineering (8723)
- Bioinformatics (29129)
- Biophysics (14936)
- Cancer Biology (12049)
- Cell Biology (17359)
- Clinical Trials (138)
- Developmental Biology (9406)
- Ecology (14144)
- Epidemiology (2067)
- Evolutionary Biology (18268)
- Genetics (12221)
- Genomics (16767)
- Immunology (11843)
- Microbiology (28014)
- Molecular Biology (11560)
- Neuroscience (60814)
- Paleontology (450)
- Pathology (1864)
- Pharmacology and Toxicology (3231)
- Physiology (4940)
- Plant Biology (10384)
- Synthetic Biology (2878)
- Systems Biology (7333)
- Zoology (1642)